Agents for preventing and treating disorders involving modulation of the ryanodine receptors

ABSTRACT

Methods for reducing toxicity or side effects caused by administration of a rycal compound for repairing ryanodine receptor channel leaks when treating a disorder in a subject caused by such leaks. These methods are based upon the selection for administration of those rycal compounds having properties including an EC 50  value of 102 nM when assayed for its ability to facilitate the rebinding of FKBP12.6 to PKA-phosphorylated RyR2 or less and less than 50% inhibition of the hERG K +  channel (I Kr ) when administered at 10 μM to reduce compound toxicity or side effects after administration compared to other rycal compounds not having those properties.

CROSS-REFERENCE TO RELATED APPLICATIONS

This application is a continuation of application 12/938,098 filed Nov. 2, 2010, which is a continuation-in-part of (a) U.S. patent application Ser. No. 11/506,285, filed Aug. 17, 2006, now U.S. Pat. No. 7,879,840, and (b) a continuation-in-part of U.S. patent application Ser. No. 11/809,470 filed Jun. 1, 2007, abandoned. Each of (a) and (b) is a continuation-in-part of U.S. patent application Ser. No. 11/212,309, filed Aug. 25, 2005, now U.S. Pat. No. 8,022,058, which is a continuation-in-part of U.S. patent application Ser. No. 10/809,089, filed Mar. 25, 2004, now U.S. Pat. No. 7,718,644, which is a continuation-in-part of U.S. patent application Ser. No. 10/763,498, filed on Jan. 22, 2004, abandoned. Application (b) also claims the benefit of U.S. Application Nos. 60/810,748 filed Jun. 2, 2006 and 60/904,348 filed Feb. 28, 2007. The contents of each application mentioned above are expressly incorporated by reference herein.

GOVERNMENT INTERESTS

This invention was made with government support under grant number ARMY W911NF-05-1-0462 awarded by Defense Advanced Research Projects Agency (DARPA), Department of Defense. The government has certain rights in the invention.

FIELD OF THE INVENTION

This invention relates to compounds and their use to treat and prevent disorders and diseases associated with the ryanodine receptors that regulate calcium channel functioning in cells. More particularly, the invention discloses compounds that are related to 1,4-benzothiazepines and are useful to treat cardiac diseases and disorders, skeletal muscle diseases and disorders, as well as diseases, disorders and conditions affecting the nervous system, such as neuropathies, seizures, and disorders affecting cognitive functioning. The invention also discloses pharmaceutical compositions comprising the compounds and articles of manufacture comprising the pharmaceutical compositions.

BACKGROUND OF THE INVENTION

The sarcoplasmic reticulum (SR) functions, among other things, as a specialized intracellular calcium (Ca²⁺) store. Channels in the SR called ryanodine receptors (RyRs) open and close to regulate the release of Ca²⁺ from the SR into the intracellular cytoplasm of the cell. Release of Ca²⁺ into the cytoplasm from the SR increases cytoplasmic Ca²⁺ concentration. Open probability (Po) of the RyR receptor refers to the likelihood that the RyR channel is open at any given moment, and therefore capable of releasing Ca²⁺ into the cytoplasm from the SR.

There are three types of ryanodine receptors, all of which are Ca²⁺ channels: RyR1, RyR2, and RyR3. RyR1 is found predominantly in skeletal muscle as well as other tissues, RyR2 is found predominantly in the heart as well as other tissues, and RyR3 is found in the brain as well as other tissues. The RyR channels are formed by four RyR polypeptides in association with four FK506 binding proteins (FKBPs), specifically FKBP12 (calstabin1) and FKBP12.6 (calstabin2). Calstabin1 binds to RyR1, calstabin2 binds to RyR2, and calstabin1 binds to RyR3. The FKBP proteins (calstabin1 and calstabin2) bind to the RyR channel (one molecule per RyR subunit), stabilize RyR-channel functioning, and facilitate coupled gating between neighboring RyR channels, thereby preventing abnormal activation of the channel during the channel's closed state.

Protein kinase A (PKA) binds to the cytoplasmic surface of the RyR receptors. PKA phosphorylation of the RyR receptors causes partial dissociation of calstabins from RyRs. Dissociation of calstabin from RyR causes increased open probability of RyR, and therefore increased Ca²⁺ release from the SR into the intracellular cytoplasm.

Ca²⁺ release from the SR in skeletal muscle cells and heart cells is a key physiological mechanism that controls muscle performance, because increased concentration of Ca²⁺ in the intracellular cytoplasm causes contraction of the muscle.

Excitation-contraction (EC) coupling in skeletal muscles involves electrical depolarization of the plasma membrane in the transverse tubule (T-tubule), which activates voltage-gated L-type Ca²⁺ channels (LTCCs). LTCCs trigger Ca²⁺ release from the SR through physical interaction with RyR1. The resulting increase in cytoplasmic Ca²⁺ concentration induces actin-myosin interaction and muscle contraction. To enable relaxation, intracellular Ca²⁺ is pumped back into the SR via SR Ca²⁺-ATPase pumps (SERCAs), which is regulated by phospholamban (PLB) depending on the muscle fiber type.

It has been shown that disease forms that result in sustained activation of the sympathetic nervous system and increased plasma catecholamine levels cause maladaptive activation of intracellular stress pathways resulting in destabilization of the RyR1 channel closed state and intracellular Ca²⁺ leak. SR Ca²⁺ leak via RyR1 channels was found to deplete intracellular SR calcium stores, to increase compensatory energy consumption, and to result in significant acceleration of muscle fatigue. The stress-induced muscle defect permanently reduces isolated muscle and in vivo performance particularly in situations of increased demand.

It also has been shown that destabilization of the RyR1 closed state occurs under pathologic conditions of increased sympathetic activation and involves depletion of the stabilizing calstabin1 (FKBP12) channel subunit. Proof-of-principle experiments have shown that PKA activation as an end effector of the sympathetic nervous systems increases RyR1 PKA phosphorylation at Ser-2843 which decreases the binding affinity of calstabin1 to RyR1 and increases channel open probability.

In cardiac striated muscle, RyR2 is the major Ca²⁺-release channel required for EC coupling and muscle contraction. During EC coupling, depolarization of the cardiac-muscle cell membrane during phase zero of the action potential activates voltage-gated Ca²⁺ channels. Ca²⁺ influx through the open voltage-gated channels in turn initiates Ca²⁺ release from the SR via RyR2. This process is known as Ca²⁺-induced Ca²⁺ release. The RyR2-mediated, Ca²⁺-induced Ca²⁺ release then activates the contractile proteins in the cardiac cell, resulting in cardiac muscle contraction.

Phosphorylation of cardiac RyR2 by PKA is an important part of the “fight or flight” response that increases cardiac EC coupling gain by augmenting the amount of Ca²⁺ released for a given trigger. This signaling pathway provides a mechanism by which activation of the sympathetic nervous system, in response to stress, results in increased cardiac output. PKA phosphorylation of RyR2 increases the open probability of the channel by dissociating calstabin2 (FKBP12.6) from the channel complex. This, in turn, increases the sensitivity of RyR2 to Ca²⁺-dependent activation.

Despite advances in treatment, heart failure remains an important cause of mortality in Western countries. An important hallmark of heart failure is reduced myocardial contractility. In heart failure, contractile abnormalities result, in part, from alterations in the signaling pathway that allows the cardiac action potential to trigger Ca²⁺ release via RyR2 channels and muscle contraction. In particular, in failing hearts, the amplitude of the whole-cell Ca²⁺ transient is decreased and the duration prolonged.

Cardiac arrhythmia, a common feature of heart failure, results in many of the deaths associated with the disease. Atrial fibrillation (AF) is the most common cardiac arrhythmia in humans, and represents a major cause of morbidity and mortality. Structural and electrical remodeling—including shortening of atrial refractoriness, loss of rate-related adaptation of refractoriness, and shortening of the wavelength of re-entrant wavelets—accompany sustained tachycardia. This remodeling is likely important in the development, maintenance and progression of atrial fibrillation. Studies suggest that calcium handling plays a role in electrical remodeling in atrial fibrillation.

Approximately 50% of all patients with heart disease die from fatal cardiac arrhythmias. In some cases, a ventricular arrhythmia in the heart is rapidly fatal—a phenomenon referred to as “sudden cardiac death” (SCD). Fatal ventricular arrhythmias and SCD also occur in young, otherwise-healthy individuals who are not known to have structural heart disease. In fact, ventricular arrhythmia is the most common cause of sudden death in otherwise-healthy individuals.

Catecholaminergic polymorphic ventricular tachycardia (CPVT) is an inherited disorder in individuals with structurally normal hearts. It is characterized by stress-induced ventricular tachycardia—a lethal arrhythmia that causes SCD. In subjects with CPVT, physical exertion and/or stress induce bidirectional and/or polymorphic ventricular tachycardias that lead to SCD even in the absence of detectable structural heart disease. CPVT is predominantly inherited in an autosomal-dominant fashion. Individuals with CPVT have ventricular arrhythmias when subjected to exercise, but do not develop arrhythmias at rest. Studies have identified mutations in the human RyR2 gene, on chromosome 1q42-q43, in individuals with CPVT.

Failing hearts (e.g., in patients with heart failure and in animal models of heart failure) are characterized by a maladaptive response that includes chronic hyperadrenergic stimulation. In heart failure, chronic beta-adrenergic stimulation is associated with the activation of beta-adrenergic receptors in the heart, which, through coupling with G-proteins, activate adenylyl cyclase and thereby increase intracellular cAMP concentration. CAMP activates cAMP-dependent PKA, which has been shown to induce hyperphosphorylation of RyR2. Thus, chronic heart failure is a chronic hyperadrenergic state that results in several pathologic consequences, including PKA hyperphosphorylation of RyR2.

The PKA hyperphosphorylation of RyR2 has been proposed as a factor contributing to depressed contractile function and arrhythmogenesis in heart failure. Consistent with this hypothesis, PKA hyperphosphorylation of RyR2 in failing hearts has been demonstrated, in vivo, both in animal models and in patients with heart failure undergoing cardiac transplantation.

In failing hearts, the hyperphosphorylation of RyR2 by PKA induces the dissociation of FKBP 12.6 (calstabin2) from the RyR2 channel. This causes marked changes in the biophysical properties of the RyR2 channel, including increased open probability (Po) due to an increased sensitivity to Ca²⁺-dependent activation; destabilization of the channel, resulting in subconductance states; and impaired coupled gating of the channels, resulting in defective EC coupling and cardiac dysfunction. Thus, PKA-hyperphosphorylated RyR2 is very sensitive to low-level Ca²⁺ stimulation, and this manifests itself as a diastolic SR Ca²⁺ leak through the PKA hyperphosphorylated RyR2 channel.

The maladaptive response to stress in heart failure results in depletion of FKBP12.6 from the channel macromolecular complex. This leads to a shift to the left in the sensitivity of RyR2 to Ca²⁺-induced Ca²⁺ release, resulting in channels that are more active at low-to-moderate Ca²⁺ concentrations. Over time, the increased “leak” through RyR2 results in resetting of the SR Ca²⁺ content to a lower level, which in turn reduces EC coupling gain and contributes to impaired systolic contractility.

Additionally, a subpopulation of RyR2 that are particularly “leaky” can release SR Ca²⁺ during the resting phase of the cardiac cycle, diastole. This results in depolarizations of the cardiomyocyte membrane known as delayed after-depolarizations (DADs), which are known to trigger fatal ventricular cardiac arrhythmias.

In patients with CPVT mutations in their RyR2 and otherwise structurally-normal hearts, a similar phenomenon is at work. Specifically, it is known that exercise and stress induce the release of catecholamines that activate beta-adrenergic receptors in the heart. Activation of the beta-adrenergic receptors leads to PKA hyperphosphorylation of RyR2 channels. Evidence also suggests that the PKA hyperphosphorylation of RyR2 resulting from beta-adrenergic-receptor activation renders mutated RyR2 channels more likely to open in the relaxation phase of the cardiac cycle, increasing the likelihood of arrhythmias.

Cardiac arrhythmias are known to be associated with diastolic SR Ca²⁺ leaks in patients with CPVT mutations in their RyR2 and otherwise structurally-normal hearts. In these cases, the most common mechanism for induction and maintenance of ventricular tachycardia is abnormal automaticity. One form of abnormal automaticity, known as triggered arrhythmia, is associated with aberrant release of SR Ca²⁺, which initiates DADs. DADs are abnormal depolarizations in cardiomyocytes that occur after repolarization of a cardiac action potential. The molecular basis for the abnormal SR Ca²⁺ release that results in DADs has not been fully elucidated. However, DADs are known to be blocked by ryanodine, providing evidence that RyR2 plays a key role in the pathogenesis of this aberrant Ca²⁺ release.

It has been shown that exercise-induced arrhythmias and sudden death (in patients with CPVT) result from a reduced affinity of FKBP12.6 (calstabin2) for RyR2. Additionally, it has been demonstrated that exercise activates RyR2 as a result of phosphorylation by adenosine 3′,5′-monophosphate (cAMP)-dependent protein kinase (PKA). Mutant RyR2 channels, which had normal function in planar lipid bilayers under basal conditions, were more sensitive to activation by PKA phosphorylation—exhibiting increased activity (open probability) and prolonged open states, as compared with wild-type channels. In addition, PKA-phosphorylated mutant RyR2 channels were resistant to inhibition by Mg²⁺, a physiological inhibitor of the channel, and showed reduced binding to FKBP12.6 (aka calstabin2, which stabilizes the channel in the closed state). These findings indicate that, during exercise, when the RyR2 are PKA-phosphorylated, the mutant CPVT channels are more likely to open in the relaxation phase of the cardiac cycle (diastole), increasing the likelihood of arrhythmias triggered by SR Ca²⁺ leak.

Fatigue is the process whereby skeletal muscles become weaker with repeated or intense use such as exercise, or as a result of an illness, disorder or disease. Fatigue can result in task failure and it can be a pronounced symptom in a variety of medical conditions including heart failure, renal failure, cancer, and various muscular dystrophies. Over the past decade, it has become evident that the two dominant classical explanations of muscle fatigue, namely, accumulation of lactic acid and intracellular acidosis, do not cause fatigue. In fact, both may be protective mechanisms during high intensity exercise to prevent fatigue (Allen and Westerblad 2004; Pedersen, Nielsen et al. 2004).

Muscle contraction depends on the efficient coupling of electrical stimulation of the muscle surface to Ca²⁺ release via the ryanodine receptor, the SR Ca²⁺ release channel, to the generation of actinmyosin cross bridges. It is evident, then, that a defect in excitation-contraction coupling that resulted in a reduction in the amplitude of the Ca²⁺ transient would, among other effects, result in impaired contraction and force generation through ineffective myosin cross bridge formation. Eberstein and Sandow suggested inhibition of Ca²⁺ release as a likely factor in the fatigue process (Eberstein and Sandow 1963). Reductions in the amplitude of Ca²⁺ release evoked during fatiguing stimulation have been reported in multiple muscle preparations (Allen, Lee et al. 1989; Westerblad and Allen 1991; Allen and Westerblad 2001). The time course of recovery from fatigue parallels the time course over which prolonged depression of Ca²⁺ release is observed (Westerblad, Bruton et al. 2000).

SR Ca²⁺ leak was documented in myofibers following intense exercise and in a model of muscular dystrophy (Wang, Weisleder et al. 2005), possibly due to defective skeletal ryanodine receptors (RyR1 s). Chronic activation of the sympathetic nervous system (SNS) in the context of heart failure promotes intrinsic skeletal muscle fatigue due to depletion of the phosphodiesterease PDE4D3 from the RyR1 complex, RyR1 PKA hyperphosphorylation at Serine 2844, calstabin1 depletion from the RyR1 complex, and a gain-of-function channel defect (Reiken, Lacampagne et al. 2003). RyR1 dysfunction in the skeletal muscle leads to altered local subcellular Ca²⁺ release events and impaired global calcium transients (Ward, Reiken et al. 2003). JTV-519, (4-[3-(4-benzylpiperidin-1-yl)propionyl]-7-methoxy-2,3,4,5-tetrahydro-1,4-benzothiazepine monohydrochloride-a 1,4-benzothiazepine has been shown to be a modulator of RyR calcium-ion channels), given in the context of a murine model of heart failure, was able to improve skeletal muscle function, as assessed by an ex vivo isolated muscle fatiguing protocol, five weeks after left coronary artery ligation. JTV-519's beneficial effect on muscle fatigue was not solely due to cardiac improvement, as a beneficial effect was still seen when the drug was given to calstabin2 deficient mice which derive no cardiac benefit from treatment with JTV-519. Thus, it has been postulated that JTV-519 directly affects muscle function (Wehrens, Lehnart et al. 2005). In the context of chronic exercise, identical changes in the RyR1 macromolecular complex, namely depletion of PDE4D3 from the RyR1 complex, RyR1 PKA hyperphosphorylation at Serine 2844, and calstabin1 depletion from the RyR1 complex are related in a time-dependent and activity-dependent manner with repeated intense exercise in a mouse model. These biochemical changes in the RyR1 macromolecular complex regulation and function are stable following prolonged exercise and recover slowly over days to weeks. It has therefore been proposed that RyR1 Ca²⁺ leak limits peak muscle performance and mediates muscle damage during prolonged, stressful exercise.

The contraction of striated muscle is initiated when calcium (Ca²⁺) is released from tubules within the muscle cell known as the sarcoplasmic reticulum (SR). Calcium release channels, called ryanodine receptors (RyR), on the SR are required for excitation-contraction (EC) coupling. The type 2 ryanodine receptor (RyR2) is found in the heart, while the type 1 ryanodine receptor (RyR1) is found in skeletal muscle. The RyR1 receptor is a tetramer comprised of four 565,000 dalton RyR1 polypeptides and four 12,000 dalton FK-506 binding proteins (FKBP12). FKBP12s are regulatory subunits that stabilize RyR channel function (Brillantes et al., 1994) and facilitate coupled gating between neighboring RyR channels (Marx et al., 1998); the latter are packed into dense arrays in specialized SR regions that release intracellular stores of Ca²⁺, thereby triggering muscle contraction. In addition to FKBP12, the RyR1 macromolecular complex also includes the catalytic and regulatory subunits of PKA, and the phosphatase PP1 (Marx et al., 2001).

One FKBP12 molecule is bound to each RyR1 subunit. Dissociation of FKBP12 significantly alters the biophysical properties of the channels, resulting in the appearance of subconductance states, and increased open probability (P_(o)) of the channels (Brillantes et al., 1994; Gaburjakova et al., 2001). In addition, dissociation of FKBP12 from RyR1 channels inhibits coupled gating resulting in channels that gate stochastically rather than as an ensemble (Marx et al., 1998). Coupled gating of arrays of RyR channels is thought to be important for efficient EC coupling that regulates muscle contraction (Marx et al., 1998). FKBPs are cis-trans peptidyl-prolyl isomerases that are widely expressed and subserve a variety of cellular functions (Marks, 1996). FKBP12s are tightly bound to and regulate the function of the skeletal (RyR1) (Brillantes et al., 1994; Jayaraman et al., 1992) and cardiac (RyR2) (Kaftan et al., 1996) muscle Ca²⁺ release channels, as well as a related intracellular Ca²⁺ release channel known as the type 1 inositol 1,4,5-triphosphate receptor (IP3R1) (Cameron et al., 1997), and the type I transforming growth factor β (TGFβ) receptor (TβRI) (Chen et al., 1997).

U.S. Pat. No. 7,312,044, the contents of which are hereby incorporated by reference, discloses methods of treating defective skeletal muscle function during heart failure by administering an agent which inhibits dissociation of FKB12 binding protein from RyR1 receptor.

Co-pending U.S. patent application Ser. No. 11/212,309 and U.S. Pat. No. 7,704,990, the contents of which are hereby incorporated by reference, disclose methods of making and using novel benzothiazepine derivatives to treat and prevent disorders and diseases associated with the RyR receptors, including skeletal muscular disorders and diseases such as skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence.

There is a need to identify new agents effective for treating or preventing muscle fatigue that is stress or exercise induced or that results from diseases associated with the RyR receptors that regulate calcium channel functioning in cells, including cardiac disease or disorder, defective skeletal muscle function, HIV Infection, AIDS, muscular dystrophy, cancer, malnutrition, exercise-induced muscle fatigue, age-associated muscle fatigue, renal disease, and renal failure.

SUMMARY OF THE INVENTION

In view of the foregoing, there is a need to identify new agents effective for treating or preventing disorders and diseases associated with the RyRs that regulate calcium channel functioning in cells, including skeletal muscular disorders and diseases and especially cardiac disorders and diseases. More particularly, a need remains to identify new compounds that can be used to treat RyR associated disorders by, for example, repairing the leak in RyR channels, and enhancing binding of FKBP proteins (calstabin1 and calstabin2) to PKA-phosphorylated RyR, and to mutant RyRs that otherwise have reduced affinity for, or do not bind to, FKBP12 and FKBP12.6. Embodiments of the invention solve some or all of these needs.

In one embodiment, the present invention provides a compound represented by the structure of formula I:

wherein n, q, R, R₁, R₂, R₃ and R₄ are as defined herein.

Certain compounds of formula I are defined by any of formulae I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o and I-p as defined herein.

Non-limiting examples of compounds of formula I are compounds selected from the group consisting of S1, S2, S3, S4, S5, S6, S7, S9, S11, S12, S13, S14, S19, S20, S22, S23, S36, S37, S38, S40, S43, S44, S45, S46, S47, S48, S49, S50, S51, S52, S53, S54, S55, S56, S57, S58, S59, S60, S61, S62, S63, S64, S66, S67, S69, S71, S72, S73, S74, S75, S76, S77, S78, S79, S80, S81, S82, S83, S84, S85, S86, S87, S88, S89, S90, S91, S92, S93, S94, S95, S96, S97, S98, S99, 5100, 5101, 5102, 5103, S104, S107, S108, S109, S110, S111, S112, S113, S114, S117, S118, S119, S120, S121, S122 and S123, and salts thereof.

In other embodiments, the present invention provides methods of treating a disorder or a disease in a subject, or reducing the risk of sudden cardiac death in a subject who is considered to be subject to such risk, comprising administering to the subject a therapeutically effective amount of a compound according to claim 1 to effectuate the treatment, wherein the disorder or disease is selected from the group consisting of cardiac disorders and diseases, skeletal muscular disorders and diseases, cognitive disorders and diseases, malignant hyperthermia, diabetes, and sudden infant death syndrome; wherein the cardiac disorders and diseases are selected from the group consisting of irregular heartbeat disorders and diseases; exercise-induced irregular heartbeat disorders and diseases; heart failure, congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure; wherein the skeletal muscular disorders and diseases are selected from the group consisting of skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence; and wherein the cognitive disorders and diseases are selected from the group consisting of Alzheimer's Disease, forms of memory loss, and age-dependent memory loss.

In one embodiment, the compound is administered to the subject to treat cardiac disorders and diseases selected from the group consisting of irregular heartbeat disorders and diseases; exercise-induced irregular heartbeat disorders and diseases; congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure.

In some embodiments, the irregular heartbeat disorders and diseases and exercise-induced irregular heartbeat disorders and diseases are selected from the group consisting of atrial and ventricular arrhythmia; atrial and ventricular fibrillation; atrial and ventricular tachyarrhythmia; atrial and ventricular tachycardia; catecholaminergic polymorphic ventricular tachycardia (CPVT); and exercise-induced variants thereof.

In another embodiment, the compound is administered to the subject to treat skeletal muscular disorders and diseases selected from the group consisting of skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence.

In another embodiment, the compound is administered to the subject to treat cognitive disorders and diseases selected from the group consisting of Alzheimer's Disease, forms of memory loss, and age-dependent memory loss.

Other features and advantages of the present invention will become apparent from the following detailed description. It should be understood, however, that the detailed description and the specific examples while indicating various embodiments of the invention are given by way of illustration only, since various changes and modifications within the spirit and scope of the invention will become apparent to those skilled in the art from this detailed description.

BRIEF DESCRIPTION OF THE FIGURES

FIG. 1, embodiments A, B, C, and D are, respectively, (A) immunoblots of PKA phosphorylated RyR2 in the presence of FKBP12.6 and increasing JTV-519 concentrations; (B) immunoblots of PKA phosphorylated RyR2 in the presence of 0.5 nM S36; (C) a graph of current through plasma membrane, voltage dependent L-type Ca²⁺ channels which are completely blocked by nifedipine but not by S36 in isolated mouse cardiomyocytes; and (D) a graph of the voltage-dependence of L-type Ca²⁺ current in channels in the presence of JTV-519 and S36.

FIG. 2, embodiments A, B, C, and D demonstrate the prevention of exercise-induced ventricular arrhythmias by JTV-519 in haploinsufficient calstabin (FKBP12.6)^(+/−) mice. Embodiment A are representative telemetric electrocardiograms (ECGs) of an untreated calstabin2 (FKBP12.6)^(−/−) mouse (left), a JTV-519-treated calstabin2 (FKBP12.6)^(+/−) mouse (middle), and a calstabin2 (FKBP12.6)^(−/−) mouse (right). Embodiment B are telemetry recordings of a sustained polymorphic ventricular tachycardia (sVT) in (upper) an untreated haploinsufficient calstabin2 (FKBP12.6)^(+/−) mouse and (lower) a JTV-519-treated calstabin2 (FKBP12.6)^(+/−) mouse, each subjected to exercise testing immediately followed by injection with 0.5 mg epinephrine per kilogram of body weight. Embodiment C are graphs showing the numbers of mice with cardiac death (left), sustained VTs (middle), and nonsustained VTs (right) in experimental groups of mice subjected to exercise testing and injection with 0.5 mg/kg epinephrine. Embodiment D provides graphs comparing the dose dependence of pharmacological effects of JTV-519 and S36 in regard to sudden cardiac death (left), sustained VTs (middle), and nonsustained VTs (right).

FIG. 3 is a graph showing fractional shortening (FS) of the left ventricle assessed by M-mode echocardiography 2 weeks post-myocardial infarction in mice.

FIG. 4 is a graph showing heart weight to body weight (HW/BW) ratios and pressure-volume loops quantifications (dP/dt) one week post-myocardial infarction of placebo and S36-treated mice. S36 treatment results in a beneficial reduction of the HW/BW ratio and increased velocity of pressure development in S36 as compared to placebo treated mice.

FIG. 5 is a graph summarizing EC₅₀ values of JTV-519 and a series of Rycal compounds indicating several compounds with a higher biologic activity as evidenced by significantly lower EC₅₀ values compared to JTV-519.

FIG. 6, embodiments A, B, and C are, respectively, (A) single-channel current traces of RyR2-P2328S and RyR2-WT; (B) single-channel current traces of RyR2-P2328S; and (C) immunoblot analysis of calstabin-2 binding of RyR2-P2328S.

FIG. 7, embodiments A and B, are, respectively, (A) an immunoblot of RyR2 immunoprecipitated with an antibody against RyR2, and immunoblots of RyR2 PKA phosphorylation at Ser-2809 and calstabin2; and (B) a bar graph quantifying the relative amount of PKA phosphorylated RyR2 at Ser-2808 (corresponding to human Ser-2809) bound to RyR2 in wild-type (control) and calstabin2-deficient (FKBP 12.6^(−/−)) mice.

FIG. 8, embodiments A, B, and C, are, respectively, bar graphs of (A) quantitative in vivo M-mode echocardiograms comparing ejection fraction (EF) before and following sham operation or permanent left anterior descending (LAD) coronary artery ligation in wild-type and RyR2-S2808A knockin mice; (B) in vivo pressure-volume loop quantification of maximal pressure change over time (dP/dt) in wild-type and RyR2-S2808A knockin mice after sham operation or permanent left anterior descending coronary artery (LAD) ligation; and (C) quantitative M-mode echocardiographic assessment of end-systolic diameter (ESD) in wildtype and RyR2-S2808A knockin mice after sham operation or permanent left anterior descending coronary artery (LAD) ligation.

FIG. 9, embodiments A and B, are, respectively, immunoblots of RyR1, RyR1-pSer²⁸⁴³, and RyR1-associated calstabin1 in mdx mice and wild-type mice; and bar graphs of the relative amounts of RyR1-pSer²⁸⁴³ and calstabin1 in mdx and wild-type mice.

FIG. 10, embodiments A, B, and C, demonstrate that a SR Ca²⁺ leak is detectable in the skeletal muscles of animals with heart failure. Embodiments A and B are fluorescence line scan images of Ca²⁺ sparks in myofibers from, respectively, sham and postmyocardial infarction (PMI) rats. Embodiment C provides bar graphs summarizing the amplitude, rise time, FDHM, and FWHM of the Ca²⁺ sparks for the sham (open symbols) and PMI (closed symbols) rats.

FIG. 11, embodiments A, B, C, and D, demonstrate that PKA phosphorylation of Ser-2843 increases the open probability and gating kinetics of RyR1 channels. Embodiment A provides single channel current traces and corresponding histogram of wild-type RyR1. Embodiment B provides single channel current traces and corresponding histogram of wild-type RyR1 that is PKA phosphorylated. Embodiment C provides single channel current traces and corresponding histogram of RyR1-Ser-2843A. Embodiment D provides single channel current traces and corresponding histogram of RyR1-Ser-2843D.

FIG. 12, embodiments A and B, demonstrate the PKA hyperphosphorylation and calstabin1 deficiency of RyR1 channels after sustained exercise. Embodiment A are immunoblots of RyR1, RyR1-pSer²⁸⁴⁴, RyR1-pSer²⁸⁴⁹, and calstabin1 for control and swim mice following an exercise regime. Embodiment B is a bar graph summarizing the relative amounts of the indicated compounds following the exercise regime.

FIG. 13, embodiments A and B, demonstrate that RyR1 PKA phosphorylation increases after exposure to increasing durations of sustained exercise. Embodiment A provides immunoblots of RyR1 and RyR1-pSer²⁸⁴⁴ following increasing durations of sustained exercise. Embodiment B is a graph showing the relative PKA phosphorylation of RyR1 for varying durations of exercise.

FIG. 14, embodiments A, B, and C, demonstrate that RyR1 PKA phosphorylation increases with muscle fatigue. Embodiments A and B are, respectively, fatigue time tracings and a bar graph showing mean fatigue times for rat soleus muscle of heart failure and control subjects. Embodiment C is a graph of PKA phosphorylation versus fatigue time.

FIG. 15 are trichrome and hematoxylin-eosin stains of cross-sections of the mouse M. extensor digitorum longus, and demonstrates myofiber degeneration consistent with dystrophic remodeling following sustained exercise.

FIG. 16 shows a sample hERG current trace before (control) and after application of ARM036 at 100 μM. Also shown is the voltage pulse protocol used to evoke the hERG currents.

FIG. 17 shows a typical time course of the effect of ARM036 on hERG current amplitude. Application of 10 μM ARM036 is indicated by the horizontal bar.

FIGS. 18 to 34 are concentration-response graphs showing the percent inhibition of hERG current after application of various concentrations of ARM036, ARM036-Na, ARM047, ARM048, ARM050, ARM057, ARM064, ARM074, ARM075, ARM076, ARM077, ARM101, ARM102, ARM103, ARM104, ARM106 and ARM107, respectively.

FIGS. 35A and B are concentration-response graphs showing the percent inhibition of hERG current after application of S26 (A) or JTV-519 (“ARM00X”) (B) at various concentrations.

FIG. 36 shows tracking data during swimming on the first day of exercise for control vehicle treated (PBS) mice and mice treated with S36. Individual mouse velocities over five minute time intervals are shown in Embodiment A and mean velocities of each treatment group are shown in Embodiment B (n=4 PBS, n=4 S36). After one day of exercise, there is no substantial difference between the treatment groups. Fg-100, fg-103, fg-105, fg-106 indicates mice treated with S36. Fg-101, fg-102, fg-104, fg-107 indicates mice treated with PBS.

FIG. 37 shows that there is no substantial difference between the different treatment groups after 7 days of exercise. Embodiments A and B show results of swimming exercise for PBS and S36 treated mice. Individual mouse velocities over five minute time intervals are shown in Embodiment A and mean velocities of each treatment group are shown in FIG. 37B (n=3 PBS, n=4 S36). Embodiments C-F show results of a treadmill running exercise on day 7. As described, mice were run on the treadmill on an exercise protocol of increasing intensity, shown on the left marked velocity (m/min) in grey. Embodiment C shows individual traces reflecting the number of visits to the shocking area at the rear of the treadmill over each three minute interval. Task failure can be clearly appreciated from the rapid rise in visits to the shocking area as the mice fail. Embodiment D shows the number of shocks delivered to each mouse in each three minute interval, on an inverted axis, plotted as points with a three point moving average interpolation for each mouse. Embodiment E depicts quantification of total distance run in meters before failure for PBS and S36 treatment groups (n=3 PBS, n=4 S36), and Embodiment F depicts quantification of fatigue times, defined as time to task failure, for PBS and S36 treatment groups. (n=3 PBS, n=4 S36). No significant difference is observed between the different treatment groups.

FIG. 38 shows that after 14 days of swimming, there is no significant difference in the swimming velocities of the different treatment groups. Embodiment A shows individual mouse velocities, and Embodiment B shows mean velocities for each treatment group. n=3 PBS, n=4 S36. Treadmill running on day fourteen demonstrates a trend toward improved performance in S36 treated mice. An increasing intensity exercise protocol was used, shown on the left marked velocity (m/min) in grey. Embodiment C shows individual traces reflecting the number of visits to the shocking area at the rear of the treadmill over each three minute interval. Embodiment D shows the number of shocks delivered to each mouse in each three minute interval, on an inverted axis, plotted as points with a three point moving average interpolation for each mouse. Embodiment E depicts quantification of total distance run in meters before failure for PBS and S36 treatment groups. (n=3 PBS, n=4 S36), and Embodiment F depicts quantification of fatigue times, defined as time to task failure, for PBS and S36 treatment groups. (n=3 PBS, n=4 S36).

FIG. 39 embodiments A, B, C and D show analysis of data on day 16 of exercise regimen. Embodiments (A) and (B) shows results of treadmill running on day sixteen that replicates the trend toward improved performance in S36 treated mice. An increasing intensity exercise protocol was used, shown on the left marked velocity (m/min) in black. Embodiment A shows individual traces, which reflect the number of visits to the shocking area at the rear of the treadmill over each three-minute interval. Embodiment B shows the number of shocks delivered to each mouse in each three minute interval, on an inverted axis, plotted as points with a three point moving average interpolation for each mouse. Embodiment (C) shows quantification of total distance run in meters before failure for PBS and S36 treatment groups. (n=3 PBS, n=4 S36) Embodiment (D) shows quantification of fatigue times, defined as time to task failure, for PBS and S36 treatment groups. (n=3 PBS, n=4 S36). FIG. 39 shows that the trend toward improved performance in S36 treated mice continues on page 16.

FIG. 40 shows percent improvements in fatigue times and distance run of S36 treated mice compared to PBS vehicle treated mice under the same conditions at each day, as measured by the treadmill assay.

FIG. 41 shows that in vivo treatment with S36 (ARM036) allows RyR1 to rebind calstabin 1 despite intense chronic exercise. RyR1 was immunoprecipitated from soleus muscle homogenates of mice following 21 days of exercise with or without simultaneous subcutaneous mini-osmotic pump treatment with S36 and then western blotted back for RyR1, phospho-epitope specific RyR1-pS2844, and calstabin1 bound to the RyR1 macromolecular complex.

FIGS. 42 A and B provide data illustrating that the RyCal compound S107 reduces creatine kinase (A) and calpain (B) activity in the mdx mouse muscular dystrophy model during exercise, and indicates that RyCals are useful for treating muscle related diseases, such as muscular dystrophies.

FIG. 43 shows that the RyR1 Macromolecular Complex Undergoes Substantial Remodeling Following Exercise. A) Composition of the RyR1 complex in extensor digitorum longus (EDL) muscle following an exercise protocol (consisting of twice daily swimming) lasting the indicated number of days by immunoprecipitation of RyR1 and immunoblot for RyR, RyR1-pS2844, and PDE4D3 and calstabin1 bound to the receptor. B) Densitometric quantification of A, where each value is relative to the total RyR1 immunoprecipitated. C) Composition of the RyR1 complex in EDL muscle following low intensity and high intensity exercise for 5 days. D) Densitometric quantification of C. In all cases, the product of a single RyR1 immunoprecipitation was separated on a 4-20% gradient polyacrylamide gel, transferred, and probed for both total RyR1 and one or more of the modifications noted. The blots shown are representative of three independent experiments.

FIG. 44 shows that high intensity cycling exercise in humans results in PKA phosphorylation of RyR1, and calstabin1 and PDE4D3 depletion. A) Immunoblot of the RyR1 complex immunoprecipitated from 100 ug of muscle homogenate from human thigh biopsies before and after exercise on day 1 and day 3 (C) of a high intensity (three hours at 57% VO₂ max) cycling protocol. Control cyclists sat in the exercise room but did not exercise. Immunoblots show total RyR1, RyR1-S2844 PKA phosphorylation, bound calstabin1, and bound PDE4D3. B) and D) Quantification by densitometry of A) and C) respectively. Bar graphs depict PKA phosphorylation, calstabin1, and PDE4D3 levels in the RyR1 complex normalized to total RYR1 from control (n=6) and exercise (n=12) biopsies on each day.

FIG. 45 shows that Muscle-specific Cal1−/− Mice Have a High Intensity Exercise Defect. A) Time to failure during a single level treadmill assay on 2 month-old cal1−/− mice and w.t. littermates. B) Individual treadmill failure times for each mouse separated by gender. C) Body weights of the cal1−/− mice were reduced. D) Scatter plot of failure time versus body weight shows no correlation in either group of mice. E) Plasma creatine kinase (CPK) levels at baseline and following a single downhill eccentric treadmill run. F) RyR1 immunoprecipitated from EDL and immunoblotted for RyR, RyR1-pS2844, PDE4D3, and calstabin1. *, p<0.01, Wilcoxon rank-sum test.

FIG. 46 shows that PDE4D−/− mice have an exercise defect. A) Time to failure during a single level treadmill assay on 2 month-old PDE4D−/− mice and w.t. littermates. B) Individual treadmill failure times for each mouse. C) Body weights of the PDE4D−/− mice. D) Scatter plot of failure time versus body weight shows no correlation in either group of mice. E) Plasma creatine kinase (CPK) levels at baseline and following a single downhill eccentric treadmill run. F) RyR1 immunoprecipitated from EDL and immunoblotted for RyR, RyR1-pS2844, PDE4D3, and calstabin1. *, p<0.05, Wilcoxon rank-sum test.

FIG. 47 shows that pharmacologic rebinding of calstabin1 to RyR1 improves in vivo exercise performance. A) Time to failure during treadmill assays on indicated days of a 28 day treatment trial with S107. B) Individual treadmill failure times for each mouse on Day 21. C) Force-frequency curves of EDL muscle isolated immediately following the 21st day of exercise and isometrically stimulated in an oxygenated muscle bath. Forces (cN) are normalized to muscle cross sectional area. D) Body weights throughout the trial showed no treatment effect. E) Treadmill failure times from a parallel experiment in muscle-specific cal1−/− mice. F) RyR1 immunoprecipitated from EDL and immunoblotted for RyR, RyR1-pS2844, PDE4D3, and calstabin1. *, p<0.01, Wilcoxon rank-sum test.

FIG. 48 shows that chronic S107 treatment reduces fatiguability of isolated FDB fibers. A) Representative trace from a vehicle treated FDB fiber of fluo-4 fluorescence (ΔF/FO) normalized to the peak during repeated 300 ms long, 120 Hz field-stimulated tetani at a train rate of 0.5. Hz. Isolated cells were continuously perfused with a HEPES buffered Tyrodes solution at room temperature. B) Representative tetanic trace from an S107 treated FDB fiber. C) Mean peak tetanic calcium, as measured by fluo-4 fluorescence (ΔF/FO) normalized to the peak during fatiguing stimulation (n=11 vehicle, n=13 S107). *, p<0.02 unpaired t-test.

FIG. 49 shows that RyR1 from exercised muscle is leaky, with increased Po at resting calcium. (A) Representative traces of RyR1 channel activity at 90 nM [Ca2+]cis from sedentary mice (sed, left column), mice chronically exercised and treated with vehicle (Ex+veh, middle column) and with S107 (Ex+S107, right column). Single channel openings are plotted as upward deflections; the open and closed (c) states of the channel are indicated by horizontal bars at the beginning of the traces. Corresponding channel open probability (Po), mean open time (To) and frequency of openings (Fo) are shown above each group of traces and represent average values from all experiments. (B) Average values of open probability (left), mean open times (middle) and frequency of openings (right) of RyR1 activity from sedentary mice (sed, n=9) and mice chronically exercised treated either with vehicle (Ex+veh, n=9) or S107 (Ex+S107, n=12). Error bars indicate SEM; *, p<0.005 compared to sed; #, p<0.005 compared to Ex+S107.

FIG. 50 shows that S107 protects against chronic exercise-induced muscle damage and calpain activation. A) Plasma creatine kinase (CPK) activity levels in sedentary and chronically exercised mice with, and without, calstabin1 rebinding with S107. B) Calpain activity levels in EDL homogenates measured using a fluorogenic calpain substrate assay. *, p<0.01 unpaired t-test, S107 vs vehicle.

FIGS. 51 A, B and C show the effect of exercise on the composition of the RyR1 complex.

FIG. 52 shows the distribution of 50% reuptake times (tau) in muscle fibers in the presence or absence of S107 treatment.

FIG. 53 shows the progressive phosphorylation of RyR1 and calstabin 1 depletion from the RyR1 complex in an mdx mouse model as a factor of time.

FIG. 54 shows the effect of S107 on exercise tolerance, body weight, CPK and calpain levels in wt (unaffected) and mdx mice.

FIG. 55 shows histological slides of wt (unaffected) and mdx mice which are untreated or treated with S107.

FIG. 56 provides data illustrating that the compound S107 crosses the blood brain barrier and enhances binding of calstabin to a RyR in the brain (mid-section and cerebellum) in vivo. Data from heart and soleus muscle are also illustrated.

FIG. 57 provides a schematic representation of an experimental protocol used to test the effect of S107 on exercise performance and spatial learning in mice.

FIG. 58 shows the difference in permanence time between S107 and vehicle treated mice. A: schematic representation of platform. B: latency to target(s) for vehicle (veh) and S107 treated mice. C: mean velocity (cmls) for vehicle (veh) and S107 treated mice.

FIG. 59 shows a trend towards altered behavior consistent with improved learning and persistence in S107-treated mice (C), as compared with vehicle-treated mice (B). Panel A provides a schematic representation of the platform.

FIG. 60B is a bar graph representation showing improved learning or increased persistence with S107 treated mice, as compared with vehicle. FIG. 60A provides a schematic representation of the experimental set-up.

FIG. 61 is an immunoblot showing total RyR (types 1 and 2), phosphorylated RyR and calstabin (types 1 and 2) in control mice and mice subjected to an exercise regimen, with or without treatment with S107. Whole brain microsomes were obtained. Immunoprecipitates were separated by 4-20% PAGE and analyzed for total RyR, PKA phosphorylated RyR, and calstabin.

FIG. 62 provides a schematic representation of a protocol for evaluating the effects of restraint stress on PKA phosphorylation at different stress periods.

FIG. 63 shows PKA phosphorylation of RyR2 channels in brain following restraint induced stress in mice. Mice were restrained for time periods indicated. Ryanodine receptor (type 2) was immunoprecipitated from whole brain microsomes. Immunoprecipitates were separated by 4-20% PAGE and analyzed for total RyR2, PKA phosphorylated RyR2, and calstabin2.

FIG. 64 shows the effect of chronic restraint stress (CRS) on relative PKA phosphorylation of RyR2 in brain. Total RyR2 and PKA phosphorylated RyR2 were quantified by densitometry of the immunoblot shown in FIG. 63. The bar graphs represent the relative PKA phosphorylation of the RyR2 channel, as determined by dividing the phosphorylation signal by the RyR2 signal. (***P<0.001; **P<0.01).

FIG. 65 shows the effects of chronic restraint stress (CRS) on calstabin2 binding to RyR2 in the brain. Total RyR2 and calstabin2 were quantified by densitometry of the immunoblot shown in FIG. 63. The bar graphs represent the relative amount of calstabin2 in the immunoprecipitates and were determined by dividing the calstabin signal by the RyR2 signal. (*P<0.05).

DETAILED DESCRIPTION OF THE INVENTION

The following are definitions of terms used in the present specification. The initial definition provided for a chemical group or term herein applies to that group or term throughout the present specification individually or as part of another group, unless otherwise indicated.

As used herein and in the appended claims, the singular forms “a,” “an,” and “the” include plural references unless the content clearly dictates otherwise. Thus, for example, reference to “an agent” includes a plurality of such agents and equivalents thereof known to those skilled in the art, and reference to “the FKBP12.6 polypeptide” is a reference to one or more FKBP12.6 polypeptides (also known as calstabin2) and equivalents thereof known to those skilled in the art, and so forth. All publications, patent applications, patents, and other references mentioned herein are incorporated by reference in their entirety.

As used herein the term “fatigue” refers to skeletal muscle fatigue and/or weakness. Muscle fatigue can be due to strenuous or repeated physical activity or exercise, chronic stress, disease, disorder, syndrome or any other underlying pathophysiological condition that has symptoms of fatigue, or affects myofibers and/or muscle function. Muscle fatigue is defined as the failure of exercise performance—this can be assessed on an exercise stress test and quantified as the time it takes to fail at the given task (e.g. walking/jogging/running on a treadmill). Failure at the task is defined as termination of the exercise due to inability to continue—this is defined as muscle fatigue.

Sustained or prolonged exercise is defined as exercise performed over a defined and measurable time period.

Strenuous exercise is exercise to evoke muscle fatigue within a defined time period.

Chronic stress is defined as conditions that cause muscle fatigue chronically either due to persistent chronic exercise or stress due to chronic diseases/disorders that are often associated with chronic activation of the sympathetic nervous systems (e.g., chronic activation of the “fight or flight” response). In one embodiment, the subject's defective skeletal muscle function occurs during chronic obstructive pulmonary disease, hypertension, asthma, or hyperthyroidism.

In certain aspects, the present invention is directed to compositions and methods for the treatment and prevention of myopathies. The term “myopathy” as used herein refers to neuromuscular disorders caused by dysfunction in the muscle itself. The term “myopathy”, as used herein, encompasses all of the myopathies described herein and also all other myopathies known to those of skill in the art.

Myopathies may be inherited (such as many of the muscular dystrophies) or acquired. Myopathic diseases and disorders include, but are not limited to, congenital myopathies, muscular dystrophies (characterized by progressive weakness in voluntary muscles), mitochondrial myopathies, endocrine myopathies, muscular glycogen storage diseases, myoglobinurias, dermatomyositis, myositis ossificans, familial periodic paralysis, polymyositis, inclusion body myositis, neuromyotonia, stiff-man syndrome, common muscle cramps, and tetany.

Examples of muscular dystrophies include, but are not limited to, Duchenne muscular dystrophy, facioscapulohumeral dystrophy, limb girdle muscular dystrophy, and myotonic muscular dystrophy, Becker's muscular dystrophy, congenital muscular dystrophy, Distal muscular dystrophy, Emery-Dreifuss muscular dystrophy, Facioscapulohumeral muscular dystrophy, Limb-girdle muscular dystrophy, Myotonic muscular dystrophy, and Oculopharyngeal muscular dystrophy. Examples of mitochondrial myopathies include, but are not limited to, Kearns-Sayre syndrome, MELAS and MERRF. MELAS which is an abbreviation of “mitochondrial myopathy, encephalopathy, lactic acidosis, and stroke” is a progressive neurodegenerative disorder. MELAS affects multiple organ systems including the central nervous system (CNS), skeletal muscle, the eye, cardiac muscle, and, more rarely, the gastrointestinal and renal systems. MERFF, which is an abbreviation of “myoclonus epilepsy with ragged-red fibers” may cause epilepsy, coordination loss, dementia and muscle weakness. Examples of glycogen storage diseases of muscle include, but are not limited to, Pompe's disease, Andersen's disease, and Cori's diseases. Examples of myoglobinurias include, but are not limited to McArdle's disease, Tarui disease, and DiMauro disease.

The following are definitions of terms used in the present specification. The initial definition provided for a group or term herein applies to that group or term throughout the present specification individually or as part of another group, unless otherwise indicated.

As used herein, the term “RyCal compounds” refers to compounds of the general Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p or II as provided by the invention, and herein referred to as “compound(s) of the invention”.

The compounds of the invention are referred using a numerical naming system, with compound numbers 1 to 123 provided herein. These numbered compounds are referred to using either the prefix “S” or the prefix “ARM.” Thus, the first numbered compound is referred to either as “S1” or “ARM001”, the second numbered compound is referred to as either “S2” or “ARM002”, the third numbered compound is referred to as either “S3” or “ARM003”, and so on. The “S” and the “ARM” nomenclature systems are used interchangeably throughout the specification, the drawings, and the claims.

The term “alkyl” as used herein refers to a linear or branched, saturated hydrocarbon having from 1 to 6 carbon atoms. Representative alkyl groups include, but are not limited to, methyl, ethyl, propyl, isopropyl, butyl, sec-butyl, tert-butyl, pentyl, isopentyl, neopentyl, hexyl, isohexyl, and neohexyl. The term “C₁-C₄ alkyl” refers to a straight or branched chain alkane (hydrocarbon) radical containing from 1 to 4 carbon atoms, such as methyl, ethyl, propyl, isopropyl, n-butyl, t-butyl, and isobutyl.

The term “alkenyl” as used herein refers to a linear or branched hydrocarbon having from 2 to 6 carbon atoms and having at least one carbon-carbon double bond. In one embodiment, the alkenyl has one or two double bonds. The alkenyl moiety may exist in the E or Z conformation and the compounds of the present invention include both conformations.

The term “alkynyl” as used herein refers to a linear or branched hydrocarbon having from 2 to 6 carbon atoms and having at least one carbon-carbon triple bond.

The term “aryl” as used herein refers to an aromatic group containing 1 to 3 aromatic rings, either fused or linked.

The term “cyclic group” as used herein includes a cycloalkyl group and a heterocyclic group.

The term “cycloalkyl group” as used herein refers to a three- to seven-membered saturated or partially unsaturated carbon ring. Any suitable ring position of the cycloalkyl group may be covalently linked to the defined chemical structure. Exemplary cycloalkyl groups include cyclopropyl, cyclobutyl, cyclopentyl, cyclohexyl, and cycloheptyl.

The term “halogen” as used herein refers to fluorine, chlorine, bromine, and iodine.

The term “heterocyclic group” or “heterocyclic” or “heterocyclyl” or “heterocyclo” as used herein refers to fully saturated, or partially or fully unsaturated, including aromatic (i.e., “heteroaryl”) cyclic groups (for example, 4 to 7 membered monocyclic, 7 to 11 membered bicyclic, or 10 to 16 membered tricyclic ring systems) which have at least one heteroatom in at least one carbon atom-containing ring. Each ring of the heterocyclic group containing a heteroatom may have 1, 2, 3, or 4 heteroatoms selected from nitrogen atoms, oxygen atoms and/or sulfur atoms, where the nitrogen and sulfur heteroatoms may optionally be oxidized and the nitrogen heteroatoms may optionally be quaternized. The heterocyclic group may be attached to the remainder of the molecule at any heteroatom or carbon atom of the ring or ring system. Exemplary heterocyclic groups include, but are not limited to, azepanyl, azetidinyl, aziridinyl, dioxolanyl, furanyl, furazanyl, homo piperazinyl, imidazolidinyl, imidazolinyl, isothiazolyl, isoxazolyl, morpholinyl, oxadiazolyl, oxazolidinyl, oxazolyl, oxazolidinyl, pyrimidinyl, phenanthridinyl, phenanthrolinyl, piperazinyl, piperidinyl, pyranyl, pyrazinyl, pyrazolidinyl, pyrazolinyl, pyrazolyl, pyridazinyl, pyridooxazolyl, pyridoimidazolyl, pyridothiazolyl, pyridinyl, pyrimidinyl, pyrrolidinyl, pyrrolinyl, quinuclidinyl, tetrahydrofuranyl, thiadiazinyl, thiadiazolyl, thienyl, thienothiazolyl, thienooxazolyl, thienoimidazolyl, thiomorpholinyl, thiophenyl, triazinyl, and triazolyl. Exemplary bicyclic heterocyclic groups include indolyl, isoindolyl, benzothiazolyl, benzoxazolyl, benzoxadiazolyl, benzothienyl, quinuclidinyl, quinolinyl, tetrahydroisoquinolinyl, isoquinolinyl, benzimidazolyl, benzopyranyl, indolizinyl, benzofuryl, benzofurazanyl, chromonyl, coumarinyl, benzopyranyl, cinnolinyl, quinoxalinyl, indazolyl, pyrrolopyridyl, furopyridinyl (such as furo[2,3-c]pyridinyl, furo[3,2-b]pyridinyl] or furo[2,3-b]pyridinyl), dihydroisoindolyl, dihydroquinazolinyl (such as 3,4-dihydro-4-oxo-quinazolinyl), triazinylazepinyl, tetrahydroquinolinyl and the like. Exemplary tricyclic heterocyclic groups include carbazolyl, benzidolyl, phenanthrolinyl, acridinyl, phenanthridinyl, xanthenyl and the like.

The term “phenyl” as used herein refers to a substituted or unsubstituted phenyl group.

The aforementioned terms “alkyl,” “alkenyl,” “alkynyl,” “aryl,” “phenyl,” “cyclic group,” “cycloalkyl,” “heterocyclyl,” “heterocyclo,” and “heterocycle” may further be optionally substituted with one or more substituents. Exemplary substituents include but are not limited to one or more of the following groups: hydrogen, halogen, CF₃, OCF₃, cyano, nitro, N₃, oxo, cycloalkyl, alkenyl, alkynyl, heterocycle, aryl, alkylaryl, heteroaryl, OR_(a), SR_(a), S(═O)R_(e), S(═O)₂R_(e), P(═O)₂R_(e), S(═O)₂OR_(a), P(═O)₂OR_(a), NR_(b)R_(c), NR_(b)S(═O)₂R_(e), NR_(b)P(═O)₂R_(e), S(═O)₂NR_(b)R_(c), P(═O)₂NR_(b)R_(c), C(═O)OR_(a), C(═O)R_(a), C(═O)NR_(b)R_(c), OC(═O)R_(a), OC(═O)NR_(b)R_(c), NR_(b)C(═O)OR_(a), NR_(d)C(═O)NR_(b)R_(c), NR_(d)S(═O)₂NR_(b)R_(o) NR_(d)P(═O)₂NR_(b)R_(c), NR_(b)C(═O)R_(a), or NR_(b)P(═O)₂R_(e), wherein R_(a) is hydrogen, alkyl, cycloalkyl, alkenyl, alkynyl, alkylaryl, heteroaryl, heterocycle, or aryl; R_(b), R_(c) and R_(d) are independently hydrogen, alkyl, cycloalkyl, alkylaryl, heteroaryl, heterocycle, aryl, or said R_(b) and R_(e) together with the N to which they are bonded optionally form a heterocycle; and R_(e) is alkyl, cycloalkyl, alkenyl, cycloalkenyl, alkynyl, alkylaryl, heteroaryl, heterocycle, or aryl. In the aforementioned exemplary substitutents, groups such as alkyl, cycloalkyl, alkenyl, alkynyl, cycloalkenyl, alkylaryl, heteroaryl, heterocycle and aryl can themselves be optionally substituted.

Exemplary substituents may further optionally include at least one labeling group, such as a fluorescent, a bioluminescent, a chemiluminescent, a colorimetric and a radioactive labeling group. A fluorescent labeling group can be selected from bodipy, dansyl, fluorescein, rhodamine, Texas red, cyanine dyes, pyrene, coumarins, Cascade Blue™, Pacific Blue, Marina Blue, Oregon Green, 4′,6-Diamidino-2-phenylindole (DAPI), indopyra dyes, lucifer yellow, propidium iodide, porphyrins, arginine, and variants and derivatives thereof. For example, ARM118 of the present invention contains a labeling group BODIPY, which is a family of fluorophores based on the 4,4-difluoro-4-bora-3a,4a-diaza-s-indacene moiety. For further information on fluorescent label moieties and fluorescence techniques, see, e.g., Handbook of Fluorescent Probes and Research Chemicals, by Richard P. Haughland, Sixth Edition, Molecular Probes, (1996), which is hereby incorporated by reference in its entirety. One of skill in the art can readily select a suitable labeling group, and conjugate such a labeling group to any of the compounds of the invention, without undue experimentation.

The term “quaternary nitrogen” refers to a tetravalent positively charged nitrogen atom including, for example, the positively charged nitrogen in a tetraalkylammonium group (e.g., tetramethylammonium, N-methylpyridinium), the positively charged nitrogen in protonated ammonium species (e.g., trimethyl-hydroammonium, N-hydropyridinium), the positively charged nitrogen in amine N-oxides (e.g., N-methyl-morpholine-N-oxide, pyridine-N-oxide), and the positively charged nitrogen in an N-amino-ammonium group (e.g., N-aminopyridinium).

Throughout the specification, unless otherwise noted, the nitrogen in the benzothiazepine ring of compounds of the present invention may optionally be a quaternary nitrogen. Non-limiting examples include ARM-113 and ARM-119.

Compounds of the present invention may exist in their tautomeric form (for example, as an amide or imino ether). All such tautomeric forms are contemplated herein as part of the present invention.

The term “prodrug” as employed herein denotes a compound that, upon administration to a subject, undergoes chemical conversion by metabolic or chemical processes to yield compounds of the present invention.

All stereoisomers of the compounds of the present invention (for example, those which may exist due to asymmetric carbons on various substituents), including enantiomeric forms and diastereomeric forms, are contemplated within the scope of this invention. Individual stereoisomers of the compounds of the invention may, for example, be substantially free of other isomers (e.g., as a pure or substantially pure optical isomer having a specified activity), or may be admixed, for example, as racemates or with all other, or other selected, stereoisomers. The chiral centers of the present invention may have the S or R configuration as defined by the IUPAC 1974 Recommendations. The racemic forms can be resolved by physical methods, such as, for example, fractional crystallization, separation or crystallization of diastereomeric derivatives or separation by chiral column chromatography. The individual optical isomers can be obtained from the racemates by any suitable method, including without limitation, conventional methods, such as, for example, salt formation with an optically active acid followed by crystallization.

Compounds of the present invention are, subsequent to their preparation, preferably isolated and purified to obtain a composition containing an amount by weight equal to or greater than 99% of the compound (“substantially pure” compound), which is then used or formulated as described herein. Such “substantially pure” compounds of the present invention are also contemplated herein as part of the present invention.

All configurational isomers of the compounds of the present invention are contemplated, either in admixture or in pure or substantially pure form. The definition of compounds of the present invention embraces both cis (Z) and trans (E) alkene isomers, as well as cis and trans isomers of cyclic hydrocarbon or heterocyclic rings.

Metabolite as used herein refers to a byproduct produced in vivo, for example in a subject, from a chemical compound.

As used herein, the term “RyCal compounds” refers to compounds of the general Formula I or II as provided by the invention, and herein referred to as compound(s) of the invention. Such compounds include, but are not limited to, any one or more of the compounds of formulae including, but not limited to, the compounds of formulae 51, S2, S3, S4, S5, S6, S7, S8, S9, S10, S11, S12, S13, S14, S19, S20, S22, S23, S24, S25, S26, S36, S37, S38, S40, S43, S44, S45, S46, S47, S48, S49, S50, S51, S52, S53, S54, S55, S56, S57, S58, S59, S60, S61, S62, S63, S64, S66, S67, S68, S69, S70, S71, S72, S73, S74, S75, S76, S77, S78, S79, S80, S81, S82, S83, S84, S85, S86, S87, S88, S89, S90, S91, S92, S93, S94, S95, S96, S97, S98, S99, S100, S101, S102, S103, S104, S105, S107, S108, S109, S110, S111, S112, S113, S114, S115, S116, S117, S118, S119, S120, S121, S122, and S123, as herein defined. In certain embodiments, the compounds are isolated and substantially pure.

A subject treated by the methods of the invention can include a mammal. Such a mammal can include a human, primate, canine, equine, feline, porcine, murine, bovine, foul, ungulate or sheep. The terms “animal,” “subject” and “patient” as used herein include all members of the animal kingdom including, but not limited to, mammals, animals (e.g., cats, dogs, horses, etc.) and humans.

“PKA phosphorylation” means a reaction in which a phosphate group is substituted for a hydroxyl group by the enzyme protein kinase A (PKA).

“Back-phosphorylation” of RyR1 or RyR2 receptor means the in vitro phosphorylation of receptor by protein kinase A.

A “pharmaceutical composition” refers to a mixture of one or more of the compounds described herein, or pharmaceutically acceptable salts, hydrates, polymorphs, or prodrugs thereof, with other chemical components, such as physiologically acceptable carriers and excipients. The purpose of a pharmaceutical composition is to facilitate administration of a compound to an organism.

A compound of the present invention also can be formulated as a pharmaceutically acceptable salt, e.g., acid addition salt, and complexes thereof. The preparation of such salts can facilitate the pharmacological use by altering the physical characteristics of the agent without preventing its physiological effect. Examples of useful alterations in physical properties include, but are not limited to, lowering the melting point to facilitate transmucosal administration and increasing the solubility to facilitate administering higher concentrations of the drug.

The term “pharmaceutically acceptable acid addition salt” as used herein means any non-toxic organic or inorganic salt of any base compounds represented by Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p, or Formula II, any of their intermediates. Illustrative inorganic acids which form suitable acid addition salts include hydrochloric, hydrobromic, sulfuric and phosphoric acids, as well as metal salts such as sodium monohydrogen orthophosphate and potassium hydrogen sulfate. Illustrative organic acids that form suitable acid addition salts include mono-, di-, and tricarboxylic acids such as glycolic, lactic, pyruvic, malonic, succinic, glutaric, fumaric, malic, tartaric, citric, ascorbic, maleic, benzoic, phenylacetic, cinnamic and salicylic acids, as well as sulfonic acids such as p-toluene sulfonic and methanesulfonic acids. Either the mono or di-acid salts can be formed and such salts exist in either a hydrated, solvated or substantially anhydrous form. In general, the acid addition salts of compounds of the invention are more soluble in water and various hydrophilic organic solvents, and generally demonstrate higher melting points in comparison to their free base forms.

A compound of the present invention also can be formulated as a pharmaceutically acceptable salt, e.g., acid addition salt, and complexes thereof. The preparation of such salts can facilitate the pharmacological use by altering the physical characteristics of the agent without preventing its physiological effect. Examples of useful alterations in physical properties include, but are not limited to, lowering the melting point to facilitate transmucosal administration and increasing the solubility to facilitate administering higher concentrations of the drug.

The term “pharmaceutically acceptable salt” means a salt that is suitable for, or compatible with, the treatment of a patient or a subject such as a human or animal patient such as a person or dog. The salts can be any non-toxic organic or inorganic salt of any of the compounds represented by Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p, II or any of the specific compounds described herein, or any of their intermediates. Illustrative salt-forming ions include, but are not limited to, ammonium (NH₄ ⁺), calcium (Ca²⁺), iron (Fe²⁺ and Fe³⁺), magnesium (Mg²⁺), potassium (K⁺), pyridinium (C₅H₅NH⁺) quaternary ammonium (NR₄ ⁺), sodium (Na⁺), acetate, carbonate, chloride, bromide, citrate, cyanide, hydroxide, nitrate, nitrite, oxide, phosphate, sulfate, maleate, fumarate, lactate, tartrate, gluconate, besylate, and valproate. Illustrative inorganic acids that form suitable salts include, but are not limited to, hydrochloric, hydrobromic, sulfuric and phosphoric acids, as well as metal salts such as sodium monohydrogen orthophosphate and potassium hydrogen sulfate. Illustrative organic acids that form suitable acid addition salts include, but are not limited to, mono-, di-, and tricarboxylic acids such as glycolic, lactic, pyruvic, malonic, succinic, glutaric, fumaric, malic, tartaric, citric, ascorbic, maleic, benzoic, phenylacetic, cinnamic and salicylic acids, as well as sulfonic acids such as p-toluene sulfonic and methanesulfonic acids. Either mono or di-acid salts can be formed, and such salts exist in either a hydrated, solvated or substantially anhydrous form. In general, the acid addition salts of compounds of Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, or I-p, are more soluble in water and various hydrophilic organic solvents, and generally demonstrate higher melting points in comparison to their free base forms. The selection of an appropriate salt can be performed by one skilled in the art. For example, one can select salts in reference to “Handbook of Pharmaceutical Salts: Properties, Selection, and Use” by P. Heinrich Stahl and Camille G. Wermuth, or Berge (1977) “Pharmaceutcial Salts” J. Pharm Sci., Vol 66(1), p 1-19. Other non-pharmaceutically acceptable salts (e.g., oxalates) may be used, for example, in the isolation of compounds of the invention for laboratory use or for subsequent conversion to a pharmaceutically acceptable acid addition salt.

The compounds of Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p, and Formula II of the present invention may form hydrates or solvates, which are included in the scope of the claims. When the compounds of Formula I of the present invention exist as regioisomers, configurational isomers, conformers or diasteroisomeric forms all such forms and various mixtures thereof are included in the scope of Formula I. It is possible to isolate individual isomers using known separation and purification methods, if desired. For example, when a compound of Formula I of the present invention is a racemate, the racemate can be separated into the (S)-compound and (R)-compound by optical resolution. Individual optical isomers and mixtures thereof are included in the scope of Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p, and Formula II.

The term “solvate” as used herein means a compound of Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p, and Formula II or a pharmaceutically acceptable salt of a compound of Formula I, wherein molecules of a suitable solvent are incorporated in the crystal lattice. A suitable solvent is physiologically tolerable at the dosage administered. Examples of suitable solvents are ethanol, water and the like. When water is the solvent, the molecule is referred to as a “hydrate.”

The term “polymorph” refers to a particular crystalline state of a substance, having particular physical properties such as X-ray diffraction, IR spectra, melting point, and the like.

The term an “effective amount,” “sufficient amount” or “therapeutically effective amount” of an agent as used herein is that amount sufficient to effect beneficial or desired results, including clinical results and, as such, an “effective amount” depends upon the context in which it is being applied, whether the response is preventative and/or therapeutic. The term “effective amount” also includes that amount of the compound of Formula I which is “therapeutically effective” and which avoids or substantially attenuates undesirable side effects.

As used herein and as well understood in the art, “treatment” is an approach for obtaining beneficial or desired results, including clinical results. Beneficial or desired clinical results can include, but are not limited to, alleviation or amelioration of one or more symptoms or conditions, diminishment of extent of disease, stabilized (i.e., not worsening) state of disease, preventing spread of disease, delay or slowing of disease progression, amelioration or palliation of the disease state and remission (whether partial or total), whether detectable or undetectable. “Treatment” can also mean prolonging survival as compared to expected survival if not receiving treatment.

As used herein, the term “inhibiting dissociation” includes blocking, decreasing, inhibiting, limiting or preventing the physical dissociation or separation of an FKBP subunit from an RyR molecule in cells of the subject, and blocking, decreasing, inhibiting, limiting or preventing the physical dissociation or separation of an RyR molecule from an FKBP subunit in cells of the subject.

As used herein, the term “increasing binding” includes enhancing, increasing, or improving the ability of phosphorylated RyR to associate physically with FKBP (e.g., binding of approximately two fold or, approximately five fold, above the background binding of a negative control) in cells of the subject and enhancing, increasing or improving the ability of FKBP to associate physically with phosphorylated RyR (e.g., binding of approximately two fold, or, approximately five fold, above the background binding of a negative control) in cells of the subject.

As used herein, the term “cardiac muscle cell” includes cardiac muscle fibers, such as those found in the myocardium of the heart.

The present invention provides compounds that are capable of treating and preventing disorders and diseases associated with the RyR receptors that regulate calcium channel functioning in cells. More particularly, the present invention provides compounds that are capable of treating or preventing a leak in RyR channels. “Disorders and diseases associated with the RyR receptors” means disorders and diseases that can be treated and/or prevented by modulating the RyR receptors that regulate calcium channel functioning in cells. “Disorders and diseases associated with the RyR receptors” include, without limitation, cardiac disorders and diseases, skeletal muscular disorders and diseases, cognitive disorders and diseases, malignant hyperthermia, central core disease, diabetes, and sudden infant death syndrome. Cardiac disorder and diseases include, but are not limited to, irregular heartbeat disorders and diseases; exercise-induced irregular heartbeat disorders and diseases; sudden cardiac death; exercise-induced sudden cardiac death; congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure. Irregular heartbeat disorders and diseases include and exercise-induced irregular heartbeat disorders and diseases include, but are not limited to, atrial and ventricular arrhythmia; atrial and ventricular fibrillation; atrial and ventricular tachyarrhythmia; atrial and ventricular tachycardia; catecholaminergic polymorphic ventricular tachycardia (CPVT); and exercise-induced variants thereof. Skeletal muscular disorder and diseases include, but are not limited to, skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence. Cognitive disorders and diseases include, but are not limited to, Alzheimer's Disease, forms of memory loss, and age-dependent memory loss.

As contemplated herein, the compounds of the invention are capable of treating and preventing disorders and diseases associated with the RyR receptors that regulate calcium channel functioning in cells, by repairing the leak in RyR channels, and enhancing binding of FKBP proteins (e.g., calstabin1) to PKA-phosphorylated RyR. Thus, in one embodiment, the compounds are useful to prevent and treat muscle fatigue that is associated with the RyR receptors that regulate calcium channel functioning in cells.

In one embodiment, the compounds of the invention are effective to treat muscle fatigue that results from pathologies, illnesses, diseases, disorders or conditions that are associated with the RyR receptors that regulate calcium channel functioning in cells. Examples of such disorders and conditions include, but are not limited to, cardiac disease or disorder, defective skeletal muscle function, HIV Infection, AIDS, muscular dystrophy, cancer, malnutrition, exercise-induced muscle fatigue, age-associated muscle fatigue, renal disease, and renal failure.

Examples of cardiac disorders and diseases include, but are not limited to, irregular heartbeat disorders and diseases; exercise-induced irregular heartbeat disorders and diseases; congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure. Examples of irregular heartbeat disorders and diseases and exercise-induced irregular heartbeat disorders and diseases include, but are not limited to, atrial and ventricular arrhythmia; atrial and ventricular fibrillation; atrial and ventricular tachyarrhythmia; atrial and ventricular tachycardia; catecholaminergic polymorphic ventricular tachycardia (CPTV); and exercise-induced variants thereof.

In one embodiment, the compounds of the invention modulate calcium-ion channels in cells of the subject. In another embodiment, the compounds of the invention decrease the release of calcium into cells of the subject. In another embodiment, the compounds of the invention limit or prevent a decrease in the level of RyR-bound FKBP in the subject. In another embodiment, the compounds of the invention inhibit dissociation of FKBP and RyR in cells of the subject. In another embodiment, the compounds of the invention increase binding between FKBP and RyR in cells of the subject. In another embodiment, the compounds of the invention stabilize the RyR-FKBP complex in cells of a subject. In another embodiment, the compounds of the invention prevent, or treat a leak in a RyR receptor in the subject. In another embodiment, the compounds of the invention modulate the binding of RyR and FKBP in the subject. In another embodiment, the compounds of the invention reduce the open probability of RyR by increasing the affinity of FKBP for PKA-phosphorylated RyR. In another embodiment, the compounds of the invention reduce or inhibit calpain activity so as to treat muscle fatigue. In another embodiment, the compounds of the invention reduce plasma creatine kinase levels so as to treat muscle fatigue.

The methods of the present invention can be practiced in vitro or in vivo. Thus, in one embodiment, the methods of the present invention are practiced in an in vitro system (e.g., in a test tube on isolated cellular components). In another embodiment, the methods of the invention are practiced in vivo, e.g., in cultured cells or tissues, or in subjects.

In another embodiment, the present invention provides use of a compound represented by the structure of formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p, and Formula II in the preparation of a medicament for treating or preventing muscle disorder or disease, for example but not limited to muscle fatigue in a subject.

In another embodiment, muscle fatigue can be caused by increased stress such as in individuals exposed to a continued and prolonged exercise regimen, e.g., soldiers or athletes. Thus in one embodiment, the compounds of the invention are useful for treating muscle fatigue in individuals exposed to stress due to, for example, an intense exercise regimen. Skeletal muscular disorder and diseases include, but are not limited to, stress induced skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence.

Skeletal Muscle Fatigue

Defects in Ca2+ release channel, for example increased “leakiness” of the channel can lead to skeletal muscle fatigue. In certain aspects the invention provides that RyCal compounds which treat defects in Ca2+ release channel can be used in methods for treating, reducing or preventing muscle disorders, muscle fatigue, including but not limited to exercise-induced muscle fatigue or muscle damage, muscle fatigue or damage associated with a disease condition, for example but not limited to a myopathy, muscular dystrophy and the like. Recent studies suggesting that lactic acid accumulation may not be detrimental have raised questions about the molecular basis underlying skeletal muscle fatigue. Among hypotheses a role for defective regulation of calcium has been proposed.

The invention provides data showing altered function of the major calcium release channel in skeletal muscle sarcoplasmic reticulum (SR), the type 1 ryanodine receptor (RyR1), is required for excitation-contraction coupling (ECC), during chronic exercise. During chronic exercise the RyR1 channel is PKA hyperphosphorylated at Ser2844 (Ser2843 in human). The PKA hyperphosphorylation is associated with depletion of the phosphodiesterase PDE4D3 from the RyR1 complex. Furthermore, PKA hyperphosphorylation contribute to depletion of the RyR1 stabilizing subunit calstabin1 (FKBP12) from the channel macromolecular complex resulting in “leaky” channels (increased open probability under conditions when normal channels are not active). The degree of PKA phosphorylation, and depletion of calstabin1 and PDE4D3 are correlated with the intensity and duration of exercise and progressive fatigue. Mice with skeletal muscle-specific calstabin1 deficiency and PDE4D deficient mice both exhibited significantly impaired exercise capacity. A small molecule, S107, that specifically causes rebinding of calstabin1 to the RyR1 channel improved exercise capacity and force generation of isolated muscle during a 21 day exercise protocol. S107 treated muscle fibers exhibited reduced fatigue, as determined by measurement of intracellular calcium during repeated tetanic contractions. Furthermore, S107 treated chronically exercised mice exhibited reduced levels of plasma creatine kinase, and calcium-dependent neutral protease calpain activity in muscle homogenates. This demonstrates the existence of a mechanism of muscle fatigue, during chronic or high-intensity exercise, where SR calcium leak due calstabin1 depleted RyR1 channels leads to defective calcium signaling and skeletal muscle damage. In one aspect, the invention provides use of RyCal compounds which target molecular mechanisms of muscle fatigue, muscle conditions and disorders, and provide treatments treatment thereof.

Calcium release channel stabilizing drugs prevent muscle fatigue by preventing ryanodine receptor calcium leak during sustained or strenuous exercise. Repeated and strenuous activity of skeletal muscle may cause 1) weakness with intense use (also referred to as fatigue), 2) feeling of sore and weak muscles (referred to as perception), and 3) different degrees of muscle degeneration (referred to as dystrophic remodeling). A dominant theory of muscle fatigue has been that accumulation of intracellular lactic acid resulting in intracellular acidosis directly inhibits force production by the myofibrillar proteins (Hill et al., 1929). Indeed, at lower than physiologic temperatures (20° C.), acidotic changes of intracellular pH were found to accelerate fatigability of skeletal muscles (Hill at al., 1929). However, more recent studies have challenged the significance of acidosis for muscle fatigue by showing that repeated short tetanic contractions which induce fatigue do not result in significant intracellular pH changes under more physiologic conditions at 37° C. (Westerblad at al., 1997) where acidosis does not significantly effect force production. These findings are consistent with lactic acid which is produced during fatiguing contractions being extruded at a substantial rate by lactate transporters. However, during very intense athletic training lactic acid resulting from anaerobic breakdown of glycogen remains an important limiting factor. Importantly, intracellular acidosis was found to preserve muscle excitability and relaxation of the myofilaments during sustained increases of intracellular Ca²⁺ during repeated or sustained tetanic contractions, and thus protects from muscle fatigue (Pedersen at al. 2004).

Given that changes in intracellular pH may not represent a major fatigue mechanism, it is likely that alterations in EC coupling contribute to fatigue. Intracellular Ca²⁺ release via RyR1 channels initiates muscle contraction. Now classic physiologic experiments suggested in 1963, that reversible alterations in contractile activation may play an important role in muscle fatigue (Eberstein et al., 1963). During progressive development of fatigue resulting from repeated tetanic contractions, elevations in intracellular Ca²⁺ concentrations decline which explains reduced force production (Allen et al., 2001). However, caffeine and other compounds, which maximally activate RyR1 channels and cause sudden SR Ca²⁺ release, can briefly normalize tetanic Ca²⁺ concentrations (Allen at al., 2001). Thus alterations of RyR1-dependent SR Ca²⁺ release mechanisms are likely to be involved in fatigue development.

Measurements of SR Ca²⁺ load have demonstrated a decreased pool of releasable Ca²⁺ during skeletal muscle fatigue, which may be one of the causes of reduced SR Ca²⁺ release during fatigue. (Cooke at al. 1985). Another theory involves increased intracellular inorganic phosphate concentrations ([P_(i)]_(i)) precipitating Ca²⁺ in the SR storage organelle (Allen, 2001; Cooke, 1985). However, [P_(i)]_(i) increases occur during the early phase of fatigue resulting from rapid ATP breakdown whereas the decline of tetanic [Ca²⁺]_(i) occurs late in fatigue (phase iii). Moreover, after repeated, stretched contractions resting [Ca²⁺]_(i) was found elevated while stimulated, tetanic [Ca²⁺]_(i) decreased (Warren et al. 1993; Balnave et al. 1995). The increased resting [Ca²⁺]_(i) may initiate chronic impairment of EC coupling for example by activating proteases that can damage the SR Ca²⁺ release channel (Lamb et al., 1995; Chin et al., 1996; Bruton et al., 1996).

Fatigue from chronically sustained exercise may be caused by SR Ca²⁺ leak resulting from defective closure of the RyR1 channel and partial depletion of the SR Ca²⁺ store contributing to diminished force production and increased resting [Ca²⁺]_(i) interfering with muscle relaxation and when sustained causing muscle degeneration. Recent data shows that an evolutionary conserved stress pathway, the fight-or-flight response, specifically controls RyR1 Ca²⁺ release in skeletal muscle (Gaburjakova et al., 2001; Marx et al., 2001) and that abnormal, chronic activation of this stress pathway causes SR Ca²⁺ leak contributing to muscle fatigue (Reiken et al., 2003).

RyR1/calcium release channels become PKA hyperphosphorylated and depleted of the stabilizing protein calstabin1 during exercise. RyCal compounds of the invention increase the binding affinity of calstabin1 to PKA hyperphosphorylated RyR1. These compounds are called “calcium channel stabilizers” or “RyCals” and are in a class of 1,4-benzothiazepines and related structures. In a non-limiting example, treatment with a RyCal compound improves exercise performance of mice running on a treadmill. Furthermore, there is evidence that a calcium leak via PKA hyperphosphorylated RyR1 channels causes muscle damage due to activation of calcium-dependent proteases and RyCals prevent the calcium leak and inhibit muscle damage during chronic exercise. In certain embodiments, RyCal compound can be used to treat, prevent or improve muscle fatigue in chronic diseases including but not limited to heart failure, AIDS, cancer, renal failure, chronic obstructive pulmonary disease, hypertension, asthma, hyperthyroidism, chronic muscle fatigue. In other embodiments, RyCal compound can be used to treat or improve muscular dystrophies. In other embodiments, treatment with RyCal compound can prevent or reduce muscle fatigue which can improve exercise performance in individuals who are exposed to sustained chronic stress and/or physical exercise. In other embodiments, treatment with RyCals can prevent or reduce muscle fatigue which can improve exercise performance in individuals who are exposed to strenuous physical exercise.

Skeletal muscles become weaker with intense use also referred to as fatigue. Moreover, repeated stretch-dependent contractures can result in additional muscle damage and degeneration. Although fatigue is recognized as an important mechanism of limited peak performance and task failure during stress, the mechanisms that promote fatigue or muscle fiber damage are incompletely characterized. Moreover, defining molecular fatigue mechanisms may enable targeted interventions that could help prevent fatigue and muscle tissue damage (Wehrens, 2005). A key physiologic mechanism that controls skeletal muscle performance is intracellular calcium (Ca²⁺) release from specialized Ca²⁺ stores (the sarcoplasmic reticulum, SR) via ryanodine receptor (RyR1) Ca²⁺ release channels. In skeletal muscle, plasma membrane depolarization activates voltage-gated L-type Ca²⁺ channels (LTCCs; Ca_(V)1.1) which in turn activate RyR1s on the SR mediated by direct contact between both ion channels.

Opening of RyR1 channels results in bulk SR Ca²⁺ release which activates the myofilaments and muscle contraction. Also, disease forms associated with sustained activation of the sympathetic nervous system and increased plasma catecholamine levels cause maladaptive activation of intracellular stress pathways resulting in destabilization of the RyR1 channel closed state and intracellular Ca²⁺ leak (Reiken et al. 2003; Brillantes et al. 1994). SR Ca²⁺ leak via RyR1 channels was found to deplete intracellular SR calcium stores, to increase compensatory energy consumption, and to result in significant acceleration of muscle fatigue. The stress-induced muscle defect limits peak performance and contributes to pathologic forms of muscle fatigue that permanently reduce performance. Also, destabilization of the RyR1 closed state involves depletion of the stabilizing calstabin1 (FKBP12) channel subunit (Reiken et al. 2003; Brillantes et al. 1994). Experiments demonstrate that increasing the binding affinity of calstabin to RyR rescues channel function (Wehrens, 2003).

Skeletal muscle contraction is activated by SR Ca²⁺ release via the type 1 skeletal ryanodine receptor (RyR1). Depolarization of the T-tubule membrane activates the dihydropyridine receptor voltage sensor (Cav1.1) which in turn activates RyR1 channels via a direct protein-protein interaction causing the release of SR Ca²⁺ stores. Ca²⁺ binds to troponin C allowing actin-myosin cross-bridging to occur and sarcomere shortening. Ca²⁺ release channels comprise macromolecular complexes consisting of a homotetramer of 560 kDa RyR1 subunits that form scaffolds for proteins that regulate channel function including: protein kinase A and the phosphodiesterase PDE4D3, both of which are targeted to the channel via the anchoring protein mAKAP, PP 1 (targeted via spinophilin), and calstabin1 (FKBP12) (Jayaraman, Brillantes et al. 1992; Brillantes, Ondrias et al. 1994; Marx, Reiken et al. 2000; Marx, Reiken et al. 2001).

A defect in ECC that resulted in a reduction in the amplitude of SR Ca²⁺ release would impair contraction and force generation. Eberstein and Sandow proposed impaired SR Ca²⁺ release as a likely contributor to muscle fatigue (Eberstein and Sandow 1963). Reductions in the amplitude of SR Ca²⁺ release evoked during fatiguing stimulation have been reported (Allen, Lee et al. 1989; Westerblad and Allen 1991; Allen and Westerblad 2001). In addition, it has been shown that Ca²⁺ stores decline during intense and repeated contractions (Kabbara & Allen, 1999), and that the time course of recovery from fatigue parallels the time course over which prolonged depression of SR Ca²⁺ release is observed (Westerblad, Bruton et al. 2000). Furthermore, reduction of free SR Ca²⁺, due to inorganic calcium phosphate salt precipitation during fatigue, has been proposed (Allen and Westerblad 2001).

Evidence of defective SR Ca²⁺ release in fatigued muscle prompted examination of the role of RyR1 mediated SR Ca²⁺ release in skeletal muscle fatigue. The binding of calstabin1 (FKBP12) to RyR1 stabilizes the closed state of the channel and facilitates coupled gating between neighboring channels (Brillantes, Ondrias et al. 1994; Marx, Ondrias et al. 1998). Pharmacologic depletion of calstabin1 from RyR1 (with rapamycin or FK506 both of which bind to calstabin1 and dissociate it from the RyR1 macromolecular complex) promotes subconductance states and, in intact skeletal muscle, can cause a rapid loss of depolarization-induced contraction (Lamb and Stephenson 1996). Mutation of RyR1 resulting in the loss of calstabin1 binding causes impaired ECC with reduced maximal voltage-gated SR Ca²⁺ release without affecting the SR Ca²⁺ store content (Avila, Lee et al. 2003). Genetic deletion of FKBP12 (calstabin1) induced no gross histological or developmental defect in skeletal muscle, though severe developmental cardiac defects were observed which precluded detailed assessment of skeletal muscle function (Shou, Aghdasi et al. 1998). Whereas skeletal muscle-specific knock-out of FKBP12 (calstabin1) resulted in reduced voltage-gated SR Ca²⁺ release and increased L-type channel currents in isolated myotubes (Tang, Ingalls et al. 2004). In extensor digitalis longus (EDL), but not soleus or diaphragm, reduced maximal tetanic force and a rightward shift in force-frequency relationships were observed (Tang, Ingalls et al. 2004). These data indicated that calstabin1 modulates the gain of ECC in skeletal muscle.

The binding of calstabin1 to RyR1 is regulated by PKA phosphorylation at RyR1-S2843 (position S2844 in the mouse RyR1 sequence) (Reiken, Lacampagne et al. 2003). Phosphorylation at RyR1-S2843 increases the mean open probability of RyR1 in the lipid bilayer (Reiken, Lacampagne et al. 2003). RyR1-52843A mutant channels could not be PKA phosphorylated and did not show the same PKA-dependent increase in open probability. An RyR1-52843D mutation mimicked PKA phosphorylation with an increased open probability and destabilized open and closed states (Reiken, Lacampagne et al. 2003). The role of PKA phosphorylation of RyR1 is still under investigation as other groups have found little or no effect on channel function (Stange, Xu et al. 2003). Other post-translational modifications of RyR1 which might modulate calstabin1 binding to RyR1 have been suggested, including oxidation, and glutathionylation of the up to 50 free (reduced) thiols on each RyR monomer.

SR Ca²⁺ leak has been documented as aberrant calcium sparks in myofibers following intense exercise and in a model of muscular dystrophy (Wang, Weisleder et al. 2005), possibly due to defective RyR1 function. Chronic activation of the sympathetic nervous system (SNS) during heart failure is associated with early skeletal muscle fatigue and PKA hyperphosphorylation of RyR1 at Ser2844 (meaning that on average 3-4 of the four PKA sites in each homotetrameric channel are PKA phosphorylated in heart failure skeletal muscle), calstabin1 depletion from the RyR1 complex, and a gain-of-function channel defect (Reiken, Lacampagne et al. 2003). RyR1 dysfunction in skeletal muscle leads to altered local subcellular Ca²⁺ release events (Ward, Reiken et al. 2003).

Modifications in the RyR1 complex could alter and are likely to limit peak muscle performance, increase muscle fatigue, and contribute to muscle damage during prolonged or high intensity exercise. In certain aspects the invention provides use of a mouse model of chronic, high-intensity, forced exercise to assess the role of the RyR1 channel in skeletal muscle fatigue. As described herein, the RyR1 channel macromolecular complex undergoes remodeling during exercise such that it is progressively PKA hyperphosphorylated, and depleted of PDE4D3 and calstabin1. Functionally, this remodeling is associated with “leaky” channels (increased open probability) and activation of the calcium-activated protease calpain, and leakage of creatine kinase (CPK) into the plasma, which is consistent with muscle damage. These changes are further associated with decreased force production in isolated muscles and impaired exercise capacity and are exacerbated in mice with PDE4D deficiency or muscle specific calstabin1 deficiency. Preventing the RyR1 channel leak with a calcium channel stabilizer S107, which enhances binding of calstabin1 to RyR1, inhibits calpain activation, CPK leak and improves exercise performance. Therefore, remodeling of the RyR1 channel complex that causes leaky channels, activation of the calcium-activated protease calpain, and leakage of creatine kinase (CPK) into the plasma, is a mechanism involved in muscle fatigue during chronic or high intensity exercise.

Confocal imaging studies of intracellular Ca²⁺ release (Ca²⁺ sparks) in muscle cells after mild and strenuous treadmill exercise, showing that abnormal Ca²⁺ spark activity is induced by fatiguing exercise (Wang et al. 2005). Moreover, myofibers with abnormal Ca²⁺ spark activity resulting form strenuous exercise show histological signs of degeneration from toxic Ca²⁺ effects also known as ‘dystrophic remodeling’ (Wang et al. 2005). It is likely that sustained exercise over weeks and months results in RyR1 dysfunction, intracellular Ca²⁺ leak, depressed muscle performance, and dystrophic muscle remodeling. Furthermore, 1,4-benzothiazepine based drugs enhance peak muscle performance and prevent dystrophic remodeling by fixing stress-induced intracellular Ca²⁺ leak.

Animal models can establish, in vivo and at the level of isolated skeletal muscle cell, and single RyR1 channel, that defects in RyR1 function cause muscle fatigue and dystrophic remodeling. Use of these animal models of fatigue and the characterized muscle, cells, and channel techniques allows tests of therapeutic approaches based on fixing the leak in RyR1 which will result in improved skeletal muscle performance, decreased muscle fatigue, and reduced dystrophic remodeling during chronic forms of exercise.

Muscular Dystrophy

Myotonic dystrophy type 1 (DM1), the most common muscular dystrophy in adults (1 in 7,400 live births), is a multisystemic disorder caused by a CTG trinucleotide repeat expansion in the 3′ untranslated region of the myotonic dystrophy protein kinase (DMPK) gene which causes progressive muscle weakness, inherited muscle hyperexitability (myotonia), cardiac conduction defect, cataract, and insulin resistance (Bachinski L L, Udd B, Meola G, et al. Confirmation of the type 2 myotonic dystrophy (CCTG)n expansion mutation in patients with proximal myotonic myopathy/proximal myotonic dystrophy of different European origins: a single shared haplotype indicates an ancestral founder effect. Am J Hum Genet. October 2003; 73(4):835-848; Hamshere M G, Harley H, Harper P, et al. Myotonic dystrophy: the correlation of (CTG) repeat length in leucocytes with age at onset is significant only for patients with small expansions. J Med Genet. January 1999; 36(1):59-61; Liguori C L, Ricker K, Moseley M L, et al. Myotonic dystrophy type 2 caused by a CCTG expansion in intron 1 of ZNF9. Science. Aug. 3 2001; 293(5531):864-867). The mutant DMPK messenger RNA (mRNA) containing an expanded CUG repeat is retained in the nucleus and protein levels are reduced (Mankodi A, Logigian E, Callahan L, et al. Myotonic dystrophy in transgenic mice expressing an expanded CUG repeat. Science. Sep. 8 2000; 289(5485):1769-1773). The RNA repeat expansion changes the chromatin structure, silences the expression of the flanking SIX5 gene which codes for a transcription factors, and disrupts regulation of gene expression during development and exercise (Ebralidze A, Wang Y, Petkova V, et al. RNA leaching of transcription factors disrupts transcription in myotonic dystrophy. Science. Jan. 16 2004; 303(5656):383-387).

The cause of the most severe symptoms including muscle weakness and progressive muscle wasting appear to be caused by elevated intracellular Ca²⁺ concentrations and subsequent myofiber degeneration in DM1 (Jacobs A E, Benders A A, Oosterhof A, et al. The calcium homeostasis and the membrane potential of cultured muscle cells from patients with myotonic dystrophy. Biochim Biophys Acta. Nov. 14 1990; 1096(1):14-19). Moreover, a recent study has linked disturbed Ca²⁺ cycling in DM1 to aberrant splicing of RyR1 and SR Ca²⁺ ATPase (SERCA1) mRNAs (Kimura T, Nakamori M, Lueck J D, et al. Altered mRNA Splicing of the Skeletal Muscle Ryanodine Receptor and Sarcoplasmic/Endoplasmic Reticulum Ca2+-ATPase in Myotonic Dystrophy Type 1. Hum Mol Genet. Jun. 22 2005). A muscle-specific genetic mouse model HSA^(LR) of DM1 exists in which expanded CUG repeat expression results in a DM-like phenotype (Mankodi A, Logigian E, Callahan L, et al. Myotonic dystrophy in transgenic mice expressing an expanded CUG repeat. Science. Sep. 8 2000; 289(5485):1769-1773). HSA^(LR) have a myotonic phenotype in the absence of muscle fiber necrosis and the short—versus long-repeat expressing mouse lines show relatively less or more histopathological signs of muscle regeneration and repair, respectively (Mankodi A, Logigian E, Callahan L, et al. Myotonic dystrophy in transgenic mice expressing an expanded CUG repeat. Science. Sep. 8 2000; 289(5485):1769-1773). Since HSA^(LR) mice with short- or long repeat expression show no signs of muscle weakness and since RyR1 alterations have been linked to DM1, the HSA^(LR) mice provide a model to study the effects of exercise and activation of the sympathetic nervous system in these mice. After characterizing RyR1 channel composition, phosphorylation status, and function, the HSA^(LR) mice can be challenge with sustained exercise tests and treated with RyCal compounds. Since the mechanism by which transcripts with expanded CUG repeats cause myotonia and muscle degeneration in DM1 is not known, this would provide 1) study of a genetic animal model of severe fatigue, 2) elucidation of the key molecular mechanism of DM1, and 3) developing a therapeutic rationale for the most common muscular dystrophy in adults.

Stress Pathways and Muscle Fatigue

Sustained activation of intracellular stress pathways such as occurring during strenuous physical exercise, for example but not limited to combat, can result in reduced muscle performance and tissue damage. A major determinant of muscle damage may occur due to toxicity of continuously high catecholamine levels resulting in intracellular Ca²⁺ leak. This concept is supported by: 1) physiologic (non-combat) exercise or stress was reported to induce muscle weakness, cramps, and tissue atrophy in susceptible individuals (stress-induced rhabdomyolysis) (Wappler et al., 2001); 2) strenuous but not mild treadmill exercise induces a significantly elevated Ca²⁺ spark frequency in muscle cells indicating intracellular Ca²⁺ leak (Wang et al., 2005); 3) excess catecholamine levels were found in malignant hyperthermia (MH) and central core disease (CCD) contributing to uncontrolled intracellular Ca²⁺ release (Monnier et al. 2000; MacLennan et al. 1995); 4) a majority of MH/CCD were linked to RyR1 missense mutations (Loke et al., 2003); 5) a hyperadrenergic state as occurring in heart failure causes RyR1 hyperphosphorylation, Ca²⁺ leak, and skeletal muscle fatigue (Reiken et al. 2003); and 6) excess plasma catecholamine levels by activating β-adrenergic receptors, intracellular cAMP synthesis and protein kinase A phosphorylation results in muscle damage (Goldspink et al., 2004; Tan et al. 2003). Stress-dependent muscle damage and dysfunction occurs at the interface between intracellular catecholamine effectors (protein kinase A, PKA) and intracellular Ca²⁺ release. Skeletal ryanodine receptor (RyR1) Ca²⁺ release channels constitute intracellular scaffolds that integrate PKA-mediated stress signaling and regulation of intracellular Ca²⁺ release and therefore determine the gain of EC coupling and muscle function. Importantly, chronically increased PKA phosphorylation of RyR1 occurring from a chronic hyperadrenergic state in vivo depletes the stabilizing calstabin1 subunits resulting in SR Ca²⁺ leak and muscle fatigue. Moreover, these observations extend to an in vivo animal model of fatigue. Therefore, sustained activation of the sympathetic nervous system during continued muscle performance contributes to increased fatigue development and dystrophic skeletal muscle damage. Since skeletal RyR1 Ca²⁺ release channel is PKA hyperphosphorylated and depleted of the stabilizing calstabin1 subunit after 21 days of intense exercise, wherein similar alterations result in intracellular Ca²⁺ leak in animals with heart failure, it is likely that chronic (>1 week) forms of exercise result in adverse intracellular Ca²⁺ leak from defective RyR1 channels.

In one aspect, the invention establishes molecular mechanisms of muscle fatigue occurring from chronically sustained muscle performance. In another aspect the invention provides methods for treating or preventing detrimental intracellular Ca²⁺ leak and muscle damage by administering novel 1,4-benzothiazepine derivatives. The skeletal ryanodine receptor (RyR1) channel is comprised of 4 RyR1 subunits and associated proteins that bind to the cytoplasmic domain of the channel forming a macromolecular signaling complex. Certain aspects of the invention examine mechanisms by which allosteric modulators regulate RyR1 function. Two specific forms of allosteric modulation are examined: 1) regulation of the channel by cAMP-dependent protein kinase A (PKA) that potently activates channel gating; 2) depletion of the stabilizing subunit calstabin1 from the RyR1 channel during chronically increased PKA phosphorylation resulting from chronic activation of the sympathetic nervous system by strenuous, sustained exercise.

Dysregulation of RyR1 by PKA during sustained exercise causes intracellular Ca²⁺ leak and may be a mechanism of increased muscle fatigue and dystrophic remodeling. In certain aspects, the invention determines the effects of fatiguing exercise on 1) RyR1 PKA phosphorylation; 2) RyR1 channel function examined using RyR1 channels reconstituted into planar lipid bilayers; 3) Calstabin1 binding to RyR1; 4) intracellular Ca²⁺ sparks in isolated myofibers; 5) isolated skeletal muscle function; 6) mitochondrial integrity, 7) in vivo exercise performance, 8) skeletal muscle histology, fiber type composition and oxidative capacity, 9) creatine kinase (CK) plasma levels, 10) RyR1 PKA phosphorylation and calstabin1 depletion in leukocytes. Calstabin1 depletion during chronically sustained exercise and PKA hyperphosphorylation causes RyR1 hyperactivity, intracellular Ca²⁺ leak, depletion of SR Ca²⁺ stores, accelerated fatigue and dystrophic muscle remodeling.

In certain embodiments, treatment with any RyCal compound normalizes RyR dysfunction and intracellular Ca²⁺ leak. RyR1, which are protein kinase A (PKA) hyperphosphorylated and “leaky” in heart failure models and during strenuous exercise, can rebind calstabin1 after RyCal compound treatment, which normalizes single channel and improves muscle performance in heart failure. It is likely that RyCals in vivo and in cells treated with RyCals prevent intracellular Ca²⁺ leak and normalize RyR1 channel function during sustained exercise.

By preventing RyR1 Ca²⁺ leak, RyCal compounds improves skeletal muscle fatigue and dystrophic remodeling during strenuous exercise as occurs in combat. By using two animal models of muscle fatigue (swimming and running on a treadmill) in mice and rats, certain aspects of the invention show that treatment with RyCal compounds prevents depletion of calstabin1 from RyR1, which decreases muscle fatigue, improves performance, and inhibits dystrophic muscle remodeling.

Certain aspects of the invention identify molecular mechanisms of muscle fatigue in myotonic dystrophy (DM1). In certain embodiments, by preventing RyR1 Ca²⁺ leak, RyCal compounds improve skeletal muscle fatigue times and dystrophic remodeling in mouse models of myotonic dystrophy.

Other aspects of the invention characterize molecular fatigue mechanisms in genetic mouse models. In certain embodiments, calstabin1 and PDE4D3 knockout mice can be used to further explore molecular fatigue mechanisms and dysregulation during sustained exercise states that contribute to intracellular Ca²⁺ leak. In other aspects, the compounds of the invention reduce calpain activity. In other aspects, the compounds of the invention reduce plasma creatine kinase activity.

Other aspects of the invention, characterize mechanisms that destabilize the closed state of intracellular calcium (Ca²⁺) release channels during chronic activation of the sympathetic nervous system as occurs during sustained exercise and/or in combat. There are two allosteric modulators of skeletal ryanodine receptors (RyR1s), one is PKA and the other one is a stabilizing protein subunit of the channel (calstabin1) (Wehrens et al., 2004). Other aspects of the invention disclose therapeutic and preventive measures wherein a drug molecule that rebinds calstabin1 may prevent skeletal muscle fatigue by normalizing the skeletal (RyR1) ryanodine receptor gating. Protein kinase A (PKA) hyperphosphorylation of RyR1 during chronic activation of the sympathetic nervous system was shown to result in SR Ca²⁺ leak as a cause of fatigue (Reiken et al., 2003) which was reversed by JTV-519 (Wehrens et al., 2005). In certain aspects, the invention provides, thorough characterization of the effects of strenuous exercise on RyR1 Ca²⁺ leak, in vivo and ex vivo muscle performance and energetic metabolism, methods for the use of RyCal compounds to overcome muscle fatigue and to prevent muscle damage and/or fatigue during strenuous, and/or sustained exercise, and muscle damage and/or fatigue associated with defective skeletal muscle function, or any disease condition.

Certain aspects of the invention characterize mechanisms that destabilize the closed state of intracellular calcium (Ca²⁺) release channels which is a prerequisite for muscle relaxation to occur and prevents damage of myofibers from uncontrolled intracellular SR Ca²⁺ leak. Chronic activation of the sympathetic nervous system during forced and sustained exercise caused RyR1 PKA hyperphosphorylation, calstabin1 depletion, and a defective channel closed state are consistent with SR Ca²⁺ leak. Since stress and physical performance in combat are considered significantly more severe compared to the animal use protocols, it can be extrapolated that muscle fatigue and dystrophic degeneration from RyR1 Ca²⁺ leak represents a more severe phenotype in warfighters. The focus is on two allosteric modulators of skeletal ryanodine receptors (RyR1 s), one PKA as a key stress pathway and the other one a stabilizing protein subunit of the channel (calstabin1).

Certain aspects of the invention address potential therapeutic and preventive measures in that a drug molecule rebinding calstabin1 may prevent skeletal muscle fatigue by normalizing the skeletal (RyR1) ryanodine receptor channel gating. Protein kinase A (PKA) hyperphosphorylation of RyR1 during chronic activation of the sympathetic nervous system was shown to result in SR Ca²⁺ leak as a cause of fatigue (Wehrens X H, Lehnart S E, Reiken S, et al. Enhancing calstabin binding to ryanodine receptors improves cardiac and skeletal muscle function in heart failure. Proc Natl Acad Sci USA. Jul. 5 2005; 102(27):9607-9612; Ward C W, Reiken S, Marks A R, et al. Defects in ryanodine receptor calcium release in skeletal muscle from post-myocardial infarct rats. Faseb J. August 2003; 17(11):1517-1519). Certain aspects of the invention are directed to thorough characterization of the effects of strenuous exercise on RyR1 Ca²⁺ leak, in vivo and ex vivo muscle performance and energetic metabolism, and the use of RyCal compounds to improve muscle fatigue times, to increase exercise capacity, and to prevent muscle damage during and/or after strenuous, sustained exercise.

Life quality and prognosis in heart failure patients is decreased due to skeletal muscle dysfunction (e.g., shortness of breath due to diaphragmatic weakness, and exercise intolerance due to limb skeletal muscle fatigue) (Harrington et al. 1997). Recent studies have identified dysregulation of intracellular Ca²⁺ release from the SR as a pathogenic mechanism underlying skeletal muscle dysfunction in heart failure (Reiken S, Lacampagne A, Zhou H, et al. PKA phosphorylation activates the calcium release channel (ryanodine receptor) in skeletal muscle: defective regulation in heart failure. J Cell Biol. Mar. 17 2003; 160(6):919-928; Ward, 2003; Perreault C L, Gonzalez-Serratos H, Litwin S E, et al. Alterations in contractility and intracellular Ca2+ transients in isolated bundles of skeletal muscle fibers from rats with chronic heart failure. Circ Res. August 1993; 73(2):405-412). Heart failure in animals with myocardial infarcts causes significantly accelerated fatigue which is intrinsic to skeletal muscle as measured by the time for the tetanic force to fall below 50% of the maximal contraction (Reiken, 2003).

Skeletal RyR1 are PKA Hyperphosphorylated and Depleted of Calstabin1

Previous studies have suggested that skeletal muscle RyR1 channels are PKA hyperphosphorylated and depleted of calstabin1 in a pacing-induced canine model of heart failure and a rat post-myocardial infarct model (Reiken et al., 2003; Ward et al., 2003). Furthermore, in a mouse model of post-myocardial infarction heart failure, RyR1 in soleus muscle is PKA-hyperphosphorylated. In certain embodiments, treatment with a RyCal compound, allows rebinding of calstabin1 to RyR1 despite intense chronic exercise.

Beta-adrenergic stimulation increases the gain of the EC coupling when enhanced muscle performance is required during exercise or stress (fight-or-flight response). Binding of catecholamines to β-adrenoceptors activates a G-protein coupled intracellular signaling cascade, which leads to increased intracellular cAMP concentrations and activation of protein kinase A (PKA). PKA is targeted to RyR1 via mAKAP forming a signaling complex with the skeletal Ca²⁺ release channel (Reiken et al. 2003). RyR1 phosphorylation by PKA increases the channel open probability and SR Ca²⁺ release (Reiken et al., 2003; Wehrens et al., 2004).

Data from skeletal myofibers have confirmed intracellular Ca²⁺ leak from enhanced RyR1 activity after strenuous exercise consistent with an increased maximal rate of SR Ca²⁺ release. PKA-hyperphosphorylation of RyR1 results in depletion of calstabin1 (FKBP12) from the channel complex due to a reduced binding affinity for calstabin1. Chronic depletion of calstabin1 from the RyR1 channel complex relieves an intrinsic inhibition of the channel and induces uncontrolled intracellular Ca²⁺ leak and reduced fatigue resistance during a sustained hyperadrenergic state. Skeletal muscle fatigue is increased in heart failure patients and in animal models of heart failure (Reiken et al., 2003; Harrington et al., 1997; Perreault et al., 1993; Lunde et al. 2001; Lunde et al. 1998). In both patients and animals with heart failure the skeletal RyR1 channel isoform was found PKA hyperphosphorylated and depleted of the stabilizing calstabin1 subunits (Reiken et al., 2003; Wehrens et al., 2004). Increased fatigue and RyR1 hyperphosphorylation are associated with an increased Ca²⁺ spark frequency and a decreased Ca²⁺ spark amplitude in skeletal myofibers in heart failure animals consistent with intracellular Ca²⁺ leak and decreased SR Ca²⁺ concentrations (Reiken et al., 2003). Therefore, most likely increased muscle fatigue results from a chronic hyperadrenergic state causing an intracellular Ca²⁺ leak via defective RyR1 channels (Reiken et al., 2003).

However, it is important to conceptualize that the role of external Ca²⁺ ions in mammalian skeletal muscle contraction is not completely understood. The LTCC and RyR isoforms in skeletal and cardiac muscles are different, with skeletal muscle expressing the LTCC α1_(S) subunit (Tanabe et al., 1988) and RyR1 (Marks et al., 1989), and cardiac muscle expressing the LTCC α1_(C) subunit (Mikami et al., 1989) and RyR2 (Nakai et al., 1990). RyR1 in skeletal muscle does not depend on Ca²⁺ influx via LTCC α1_(S) to activate SR Ca²⁺ release as evidenced by continuous EC coupling in skeletal muscle cells when external Ca²⁺ is removed or when Ca²⁺ channel blockers are present (Armstrong et al., 1972; Dulhunty et al., 1988; Gonzalez-Serratos et al., 1982). Later experimental findings support RyR1 activation by physical coupling with LTCC α1_(S) (Rios et al., 1987; Tanabe et al., 1990). RyR1 Ca²⁺ leak likely increases the cellular energy demands by compensatory SR Ca²⁺ ATPase uptake consuming more ATP which may contribute to earlier skeletal muscle fatigue. From direct oxygen measurements on the surface of contracting muscle preparations, it is estimated that total ATP consumption by SR Ca²⁺ ATPases is significantly elevated in heart failure (Meyer et al., 1998) likely resulting from intracellular Ca²⁺ leak. In agreement with decreased SR Ca²⁺ concentrations due to RyR1 Ca²⁺ leak, muscle-specific calstabin1 knockout increases LTCC Ca²⁺ influx and reduces maximal voltage-gated intracellular Ca²⁺ release (Tang et al., 2004).

Recent studies have demonstrated defective function of RyR1 channels in skeletal muscle during heart failure, which were analogous to those found in RyR2 channels in failing myocardium: PKA hyperphosphorylation of RyR1 and depletion of calstabin1 (Marx et al., 2000; Reiken et al., 2003; Wehrens et al., 2005). These findings suggest that defects in RyR1 function alter intracellular Ca²⁺ handling, thereby contributing to early fatigue in skeletal muscles. Depletion of calstabin1 from the RyR1 macromolecular complex may also uncouple channels from one another and allow stochastic as opposed to coupled gating (Marx et al., 1998), thus providing an attractive hypothesis for explaining the altered Ca²⁺ spark behaviour in skeletal muscle with reduced fatigue resistance (Ward et al., 2003). Thus, alterations in RyR1 could play a significant role in the skeletal muscle specific force decrements and reduced exercise-tolerance seen in models of increased muscle fatigue.

Methods

Aerobic exercise can be defined as a form of physical exercise that increases the heart rate and enhances oxygen intake to improve performance. Examples of aerobic exercise are running, cycling, and swimming. In certain embodiments, mice were challenged by aerobic exercise (forced swimming) for 90 mins twice daily. The animals were accustomed to swimming in preliminary training sessions: day −3 twice 30 mins, day −2 twice 45 mins, day −1 twice 60 mins, day 0 and following twice 90 mins. Mice were then exercised for 1, 7, or 21 additional, consecutive days for 90 mins twice daily. Between swimming sessions separated by a 4 hour rest period the mice are kept warm and given food and water. An adjustable-current water pool was used to exercise mice by swimming. An acrylic pool (90 cm long×45 cm wide×45 cm deep) was filled with water to a depth of 25 cm. A current in the pool was generated with a pump. The current speed during the swimming session was at a constant speed of 1 l/min flow rate. The water temperature was maintained at 34° C. with an electric heater. Age- and weight-matched mice are used to exclude differences in buoyancy from body fat.

Using forced swimming as an efficient protocol to increase skeletal muscle aerobic capacity in mice (Evangelista et al., 2003), the composition and phosphorylation status of the skeletal RyR1 channel complex was investigated. Unexpectedly, after 3 weeks of 90 mins swimming twice daily, C57Bl6 wild-type mice showed significantly increased RyR2 phosphorylation by PKA while CaMKII phosphorylation was not changed. RyR1 protein expression was stable, however, RyR1 channels were depleted of the stabilizing subunit calstabin1 (FKBP12). RyR1 hyperphosphorylation and calstabin1 depletion are consistent with leaky RyR1 channels that cause intracellular Ca²⁺ leak.

To investigate the influence of the duration of sustained exercise on the RyR1 Ca²⁺ release channel defect, mice were exposed to swimming for 1, 7, or 21 days followed by immediate sacrifice. Longer exposure to sustained exercise shows a significant increase of RyR1 PKA hyperphosphorylation beginning at 7 days and saturating at 21 days.

Moreover, a mouse model of muscular dystrophy which is known to result in intracellular Ca²⁺ leak and dystrophic muscle changes was investigated. Surprisingly, soleus muscles of the dystrophin-deficient mdx mouse show calstabin1 depletion in the absence of increased RyR1-Ser2844 phosphorylation. These results identify RyR1-Ser2844 PKA hyperphosphorylation as a specific event in exercise-induced RyR1 dysfunction.

Additionally, the histological changes in the fast-twitch muscles of mice exposed to 3 weeks of exercise by swimming were characterized. Cross-sections of the mouse M extensor digitorum longus (EDL) showed histological changes consistent with myofiber degeneration from intracellular Ca²⁺ overload from defective RyR1 channel. Therefore sustained exercise for 90 mins twice daily triggers a distrophic phenotype in EDL muscles of normal C57Bl6 mice.

Up-regulation of intracellular SR Ca²⁺ release by cAMP-dependent signaling pathways augments the gain of excitation-contraction coupling during peak muscle performance. (Reiken, 2003) Therefore transient PKA phosphorylation of skeletal RyR1 Ca²⁺ release channels represents a key mechanism of the fight-or-flight response. Studies have established that dysregulation of RyR1 Ca²⁺ release channels occurs during strenuous fatiguing exercise. Mice which underwent rigorous exercise for 3 weeks showed significantly increased levels of RyR1 PKA phosphorylation, increased RyR1 channel activity, and dystrophic histological changes. Chronic RyR1 hyperphosphorylation results in depletion of the stabilizing calstabin1, functional channel defects, suggesting intracellular Ca²⁺ leak. At the level of the muscle cell, this model was recently confirmed by a report that increased Ca²⁺ spark frequency after fatiguing exercise in mouse skeletal muscle (Wang et al., 2005). Moreover, it was shown that intracellular Ca²⁺ leak from chronic exercise acts as dystrophic signal in mammalian skeletal muscle (Wang, 2005). This confirms previous observations in cardiac muscle, where hormonal and structural changes contribute to intracellular Ca²⁺ leak causing defective excitation-contraction coupling (Gomez, 1997). From these studies (Wehrens et al., 2005; Reiken et al., 2003) and the Ca²⁺ spark data in fatiguing muscle (Wang et al., 2005) it is likely that intracellular Ca²⁺ leak represents a key pathology that accelerates muscle fatigue and causes dystrophic remodeling of muscles. Accordingly, extended investigation of fatigue models at the in vivo, isolated muscle, muscle cell, mitochondria, and single RyR1 channel level will characterize detrimental effects during peak performance on muscle fatigue and dystrophic remodeling.

1,4-benzothiazepine derivatives prevent muscle dysfunction from intracellular Ca²⁺ leak under conditions of sustained sympathetic nervous system activation occurring from heart failure (Wehrens et al., 2005). In certain aspects, the invention provides RyCal compounds and their use to enhance skeletal muscle performance and to reduce muscle dysfunction during sustained stress as occurs under combat conditions. Defects in the RyR1 Ca²⁺ release channel due to dysregulation by PKA allow rationalizing of a therapeutic concept: intracellular SR Ca²⁺ leak and muscle dysfunction can be prevented by a drug that increases binding of the stabilizing calstabin1 subunit to the RyR1 channel complex and thereby inhibits SR Ca²⁺ leak and dystrophic muscle remodeling from sustained stress or exercise. Applying a drug to prevent SR Ca²⁺ leak can therefore enhance a variety of important physiologic skills which are prone to stress-induced dysfunction. In certain aspects, the invention provides that enhanced binding of calstabin1 to RyR1 by RyCal compounds prevents muscle fatigue. Using animal models of physiologic (swimming and running on a treadmill) and/or pharmacologic activation (β-adrenergic receptor agonists) of the sympathetic nervous system combined with different degrees of exercise exposure, it can be tested whether RyCal compounds improve skeletal muscle function and prevent dystrophic muscle degeneration. This may lead to a pharmacologic approach based on allosteric modulation of RyR1 that can result in improved human performance during sustained stress and prevent adverse tissue damage thereby shortening recovery times. In other aspects, the invention provides pharmacologic approaches based on allosteric modulation of RyR1 that can result in improved human performance during sustained stress and prevent adverse tissue damage and shorten recovery times.

RyR1 PKA Phosphorylation:

quantification of skeletal RyR1 channel phosphorylation by protein kinase A (PKA) following sustained exercise for 2 days, 1 week, and 3 weeks using two independent techniques (RyR1 PKA phospho-epitope detection by specific antibody; incorporation of radiolabeled phosphate by backphosphorylation essay).

RyR1 CaMKII Phosphorylation:

quantification of skeletal RyR1 channel phosphorylation by Ca²⁺-calmodulin protein kinase II (CaMKII) following sustained exercise for 2 days, 1 week, and 3 weeks using RyR1 CaMKII phospho-epitope detection by specific antibody essay developed in our laboratory. This will allow characterizing specific defects resulting from chronic PKA phosphorylation and/or secondary activation of CaMKII signaling by intracellular Ca²⁺ leak mechanisms.

Calstabin1 Depletion in the RyR1 Complex:

quantification of depletion of the channel stabilizing subunit calstabin1 (FKBP12) from the RyR1 channel complex by immunoprecipitation techniques following sustained exercise for 2 days, 1 week, and 3 weeks. Calstabin1 depletion occurs from Ser2844 phosphorylation by PKA.

RyR1 Functional Defects—

in vivo development of “leaky” RyR1 channels: electrophysiologic characterization of RyR1 single-channel activity and open probability following sustained exercise for 2 days, 1 week, and 3 weeks. This allows for a comprehensive and sensitive assessment of SR Ca²⁺ release channel defects and leak mechanisms that are known to contribute to muscle fatigue. Moreover, these data will allow developing a rationale for preventive treatment of RyR1 Ca²⁺ leak using a small lead RyCal compounds.

Improvement of Fatigue from Sustained Exercise:

quantification of in vivo fatigue using two independent exercise performance tests: swimming and running on a treadmill. The treadmill test will be combined with electrocardiogram telemetry in a subgroup of animals to allow for objective correlation of increased heart rates during exercise with fatigue symptoms. Moreover, plasma and muscle catecholamine levels will be determined to verify sustained activation of the sympathetic nervous system. Three weeks of maximal fatiguing swimming exercise induces progressive RyR1 dysfunction and dystrophic skeletal muscle changes during a low flow rate of 1 l/min (baseline condition which prevents mice from floating passively). To objectively quantify fatigue times during swimming exercise, video tracking system can be used (San Diego Instruments Incorporated) which automatically tracks and digitizes spatio-temporal movements of 8 mice. Improvement of fatigue will be assessed by time to fatigue (defined as significant increase in 2D distance or activity over time).

Improvement of Maximal Exercise Capacity:

To determine maximal endurance exercise capacity (i.e., time to exhaustion), the maximum swim times are measured at a flow rate of 7 l/min in repeated measurements three times a week. To reduce the inherent variation in swimming capacity, mice whose mean maximum swim times vary by more than 40% than the average swim time will be excluded. A mouse is qualified as fatigued when it fails to rise to the water surface to breathe and will be rescued at this point. To verify the systemic exhaustion after swimming, plasma lactate and pH will be determined in heparinized arterial blood samples. To objectively quantify fatigue times during forced swimming exercise, we will use a video tracking system (San Diego Instruments Incorporated) which automatically tracks and digitizes spatio-temporal movements of 8 mice in a 2D plane.

Isolated Skeletal Muscle Function:

ex vivo characterization of intrinsic muscle resistance to fatigue stimulation or single-twitch contraction protocols following sustained exercise with placebo or a RyCal compound treatment for 2 days, 1 week, and 3 weeks. Two different forms of isolated skeletal muscles will be tested: extensor digitorum longus for a fast-twitch muscle and soleus muscle for a slow-twitch muscle. This test can determine the effect of RyCal compounds on skeletal muscle under fatiguing exercise, or disease conditions. Skeletal muscle contraction and relaxation is critically dependent on intracellular Ca²⁺ metabolism and RyR1 function and therefore a highly sensitive test.

Intracellular Ca²⁺ Leak and SR Ca²⁺ Content in Isolated Skeletal Myofibers:

assessment of isolated skeletal muscle myofibers loaded with fluo-4 Ca²⁺ indicators for resting SR Ca²⁺ leak using intracellular Ca²⁺ sparks. SR Ca²⁺ content will be assessed by caffeine pulse protocols which result in complete release of the free SR Ca²⁺ pool. Previous studies have documented calcium leak resulting from a chronic hyperadrenergic state in myofibers of rats with heart failure (Reiken 2003; Ward 2003; Gomez 2001; Cheng 1996).

Changes in Mitochondrial Integrity from SR Ca²⁺ Leak:

mitochondria in mouse skeletal muscle take up Ca²⁺ which under conditions of strong physiologic muscle stimulation result in continuously elevated mitochondrial Ca²⁺ levels which stimulates mitochondrial metabolism (Rudolf et al., 2004). However, myotubes from dystrophic mdx mice showed significantly elevated Ca²⁺ uptake. (Robert V, Massimino ML, Tosello V, et al. Alteration in calcium handling at the subcellular level in mdx myotubes. J Biol Chem. Feb. 16 2001; 276(7):4647-4651.) Cytosolic Ca²⁺ overload is a highly toxic event that represents a common final pathway of cell death. Mitochondria are key players in cell death, and the spatial proximity of RyR1 Ca²⁺ release and mitochondrial Ca²⁺ uptake suggest, that SR Ca²⁺ leak during strenuous exercise can cause mitochondrial Ca²⁺ overload which impacts on mitochondrial structure and function and may trigger cell death. Caspase-12 is localized in the SR, is regulated by Ca²⁺, and participates in the SR stress-induced apoptosis pathway (Yoneda et al., 2001). In certain aspects the invention characterizes the effects of fatiguing exercise on mitochondrial membrane potential by rhodamine 123 uptake, mitochondrial swelling indicating mitochondrial permeability transition by 520 nm spectrophotometry and light scatter, the amount of intra-mitochondrial Ca²⁺ by organelle incubation with ⁴⁵Ca² followed by radioactivity quantification with a liquid scintillation counter, measurement of cytochrome c from release mitochondria coactivating caspases, and staining of muscle preparations for TUNEL-positive cell nuclei. The in vivo effects of RyCal compounds treatment on mitochondrial integrity and function will be assessed.

Activation of Intracellular Proteases Fragments RyR1:

A direct link exists between the cytosolic Ca²⁺ elevations and the proteolysis of intracellular targets through the activation of Ca²⁺-dependent proteases, including calpains and caspases. Calpain activation is part of the apoptosis machinery. Increased activation of the ubiquitous calpains has been found in the mouse model of Duchenne muscular dystrophy (DMD), but null mutations of muscle specific calpain causes limb girdle muscular dystrophy 2A (LGMD2A) (Tidball et al., 2000). These findings indicate that dysregulation of calpain activity contributes to progression of muscle disease by disrupting normal regulatory mechanisms and by a generalized, nonspecific increase of proteolytic capacity. RyR1 and other components of the Ca²⁺ cycling machinery are targets of and cleaved by caspases and calpains (Johnson et al., 2004; Shevchenko at al., 1998). We will therefore investigate if Ca²⁺ dependent protease and/or caspase activation result in RyR1 cleavage following strenuous exercise and if JTV-519 by inhibiting SR Ca²⁺ leak can prevent activation of unspecific proteolysis.

Histologic Changes of Skeletal Muscle from Strenuous, Fatiguing Exercise:

Dystrophic changes from sustained exercise may result in muscle fiber necrosis and progressive muscle wasting and weakness. Histological analysis of skeletal muscles will include analysis for eosinophilic hypercontracted muscle fibers, necrotic fibers, ongoing muscle regeneration, and the proliferation of fibroblasts within muscle tissue since the replacement of muscle tissue by connective tissue (fibrosis) is a major cause of permanent muscle weakness. Accordingly, RyCal compounds can be tested for inhibition of these changes. Conventional histology techniques will allow to assess variability in fiber size, split fibers, and centralized nuclei.

Fiber Typing by Histochemistry in Skeletal Muscles:

Historically, the most widely used classification of fiber types is based on the mATPase (myofibrillar adenosine triphosphatase) activity by histochemistry which distinguishes between type I (low activity) and type II (high activity) fibers (Brooke et al., 1970). By characterizing the pH lability of the mATPase, type II fibers were further subdivided into IIA and IIB fibers. Additional fiber type characterization with physiologic, histochemical, and ultrastructural methods has revealed: type I, intermediate slow-twitch oxidative; type IIA, red fast-twitch oxidative-glycolytic; and type IIB, white fast-twitch glycolytic fibers. Quantitative histochemistry can be used to determine mATPase, succinate dehydrogenase, and α-glycerophosphate dehydrogenase and cross-sectional areas in MHC-based fiber type changes in oxidative and glycolytic capacities resulting from sustained exercise and/or RyCal compound treatment. To determine myofiber ATPase activity, a protocol using 10 μm thick frozen sections which are preincubated for 5 mins under acidic or 12 mins under alkaline conditions can be used. Succinate dehydrogenase staining will allow characterizing activity and distinction between muscle fibers. Changes in oxidative muscle fiber types and improvement after treatment for myotonia have been reported in mice previously (Reininghaus et al., 1988).

Fiber Typing by Immunocytochemistry in Skeletal Muscles:

To quantitate changes in myonuclear number and location and to distinguish from nuclei of interstitial cells, morphometry by fluorescence microscopy using stains for nuclei (DAPI) and basement membrane (anti-laminin) will be applied. This technique will be particularly important to precisely determine cross-sectional area and number of nuclei in muscle fibers. Moreover, the technique allows for combined immunocytochemistry with the following affinity-purified antibodies: C-terminal RyR2-5029, phospho-epitope-specific RyR1-p2844 (Wehrens et al., 2004), calstabin1 (FKBP12) (Jayaraman et al., 1992), isoform-specific myosin heavy chain (MHC) antibodies (Rivero et al. 1999), and α-actinin (Ruehr et al., 2003) using a previously established protocol with 10 μm thick cryostat sections of EDL or soleus muscles (Moschella et al., 1995). This approach will allow us to classify myofibers and phenotypic changes according to MHC content, metabolic activity, fiber size, RyR1 PKA phosphorylation, and calstabin1 binding occurring from sustained exercise and/or RyCal compound treatment. Further, the fiber type and immunocytochemistry data will be correlated to isolated skeletal muscle function, general histologic data, histochemistry, RyR1 single-channel function, and mitochondria data. Using immunohistochemical staining, fiber type-specific improvement of calstabin1 binding to RyR1 and RyR1 PKA phosphorylation can be determined in the presence or absence, or after RyCal compound treatment in α-actinin positive compartments (Z-disk), and for increased calpain expression in the myofibrillar area (Z disks; compartment containing RyR1 channels) of muscle fibers.

Skeletal Muscle Oxidative Capacity:

Muscle oxidative activity correlates with skeletal muscle adoption to aerobic exercise. As a general test, fast- and slow-twitch skeletal muscle oxidative enzyme activity will be assessed by spectrophotometric assessment of the citric acid cycle and citrate synthase activity in muscle homogenates. Activity as determined as the complex from coenzyme A and oxaloacetate is expected to be increased as reported by a group using a similar protocol (Evangelista et al., 2003). This test will be used to confirm changes in oxidative capacity seen by histochemistry.

Improvement of Creatine Kinase (CK) Plasma Levels:

Creatine kinase (CK) and lactate dehydrogenase (LDH) plasma concentrations (Santos et al., 2004; Thompson et al., 2004), can be determined as indicators or muscle damage and inflammation after exhaustive exercise and to determine effect due to RyCal compound treatment.

RyR1 Composition and Function in White Blood Cells:

RyR1 in immune cells functions as a Ca²⁺ release channel during B- or T-cell receptor-stimulated activation (Sei et al., 2002; Kraev et al., 2003). For functional analysis, peripheral white blood cells are isolated from mouse blood samples by centrifugation. Leukocytes (10⁶/ml) are loaded with 1 μm acetoxy-methyl ester of fluo-3 (Molecular Probes, Eugene, Oreg.) by incubation for 30 mins at 25° C. and caffeine sensitivity of intracellular Ca²⁺ release is tested. Composition and PKA phosphorylation of the RyR1 channel complex will be characterized. Investigating RyR1 in white blood cells will allow monitoring temporal changes during sustained exercise and RyCal compound treatment in vivo.

Genetically Modified Mice

The RyR1 macromolecular signaling complex plays a key role in modulating activation of the channel and excitation-contraction coupling by the sympathetic nervous system. In the RyR1 complex mAKAP targets PKA and the phosphodiesterase PDE4D3 to the channel and the phosphatase PP1 is targeted to the channel by the targeting protein spinophilin. This signaling module controls PKA phosphorylation of RyR2 at Ser2843 as part of the “fight-or-flight” stress response. During normal exercise 2-3 of the four Ser2843 PKA phosphorylation sites in each tetrameric RyR1 channel are transiently PKA phosphorylated resulting in increased activity of the RyR1 channel.

Activation of the RyR1 due to PKA phosphorylation occurs because PKA phosphorylation decreases the binding affinity of the stabilizing protein calstabin1 (FKBP12) for the channel resulting in increased sensitivity of the channel to Ca²⁺-dependent activation. PDE4D3 in the RyR1 macromolecular signaling complex plays a protective role against PKA hyperphosphorylation and forms a negative feedback loop during PKA activation. The phosphodiesterases in the RyR1 complex by rapidly degrading local cAMP and thereby terminating channel activation by PKA. Mice that are deficient in PDE4D3 or calstabin1 in the RyR1 complex will be tested for accelerated muscle fatigue. Thus, both calstabin1 and PDE4D3 in the RyR2 complex can be thought of as being “protective” against muscle dysfunction during excessive exercise or stress. Thus additional components of the RyR1 macromolecular complex are protective against fatigue as these molecules could potentially be novel therapeutic targets and/or identify adverse pharmaceutical agents for preventing fatigue during intense stress in warfighters.

The muscle-specific genetic mouse model HSA^(LR) of myotonic dystrophy type 1 (DM1) has a DM-like phenotype. Importantly, the HSA^(LR) myotonic phenotype includes variable degrees of histopathological signs of muscle degeneration and repair, which correspond to the expression of more toxic, long or less, toxic short repeat variants. In addition to wild-type mice, susceptibility to muscle fatigue will be investigated using swimming and treadmill running protocols. In a subgroup of mice, implantable telemetry devices will be implanted two weeks before the mice are subjected to an exercise-stress protocol as described. Upon completion of the experiment, mice will be sacrificed and muscles will be flash-frozen in liquid nitrogen or further processed for histological assays. Specific muscle types are carefully dissected under stereoscope vision and flash frozen in liquid nitrogen or examined by histology and immunohistochemistry. In all tissue samples, RyR1 PKA phosphorylation, levels of the components of the RyR2 macromolecular complex including calstabin1, PKA, RII, mAKAP, PP1, spinophilin, PDE4D3, CaMKII, and single channel properties will be examined. The following properties are determined: Ca²⁺ sensitivity of activation and inhibition, Mg²⁺ inhibition, and changes from in vivo RyCal treatment. At conclusion of each single channel experiment ryanodine will be applied to the channel to confirm RyR identity. The HSA^(LR) mouse will allow to test beneficial effects of RyCal compounds in an extreme model of genetic muscle fatigue and dystrophy.

Susceptibility to muscle fatigue can be investigated using swimming and treadmill running protocols. Implantable telemetry devices can be implanted two weeks before the mice are subjected to an exercise-stress protocol. Upon completion of the experiment, mice are sacrificed and muscles are flash-frozen in liquid nitrogen. Upon completion of each experiment, muscles can be dissected and will also be examined by histology and Western blotting. In all tissue samples, RyR1 PKA phosphorylation, levels of the components of the RyR2 macromolecular complex including calstabin1, PKA, RII, mAKAP, PP1, spinophilin, PDE4D3, CaMKII, and single channel properties can be examined. The following properties can be determined: Ca²⁺ sensitivity of activation and inhibition, Mg²⁺ inhibition, response to PKA phosphorylation. At conclusion of each single channel experiment ryanodine is applied to the channel to confirm RyR identity.

RyCal Compounds Prevent Muscle Fatigue and Muscle Degeneration

In certain aspects, the invention provides that RyCal compounds can restore normal function to hyperphosphorylated RyR1. Furthermore, use of PDE4D knockout and FKBP12 haploinsufficient mice allows determination whether RyCal compound prevent muscle fatigue.

The foregoing discussion established two animal models (mouse and rat) of muscle dysfunction and fatiguing, which result from sustained forms of exercise. The models can provide important clues if chronic activation of the sympathetic nervous system resulting from sustained exercise and stress cause a critical defect in the RyR1 Ca²⁺ release channel. Previous experiments in a heart failure model that results in chronic sympathetic hyperactivity have established a critical defect in RyR1 contributing to accelerated muscle fatigue. RyCal compounds have beneficial effects to inhibit muscle fatigue during sustained exercise capacity, and isolated slow- and fast-twitch skeletal muscle function in the investigated fatigue models. Catecholamine-induced muscle fatigue has been established in rat and mouse hearts failure models earlier and therefore we will be able to apply similar techniques to test for muscle fatigue following sustained animal exercise protocols.

Maintenance of muscle performance during sustained activation of the sympathetic nervous system, for example but not limited to combat, requires a maximal rate of intracellular SR Ca²⁺ cycling. Chronic maximal stress results in permanent activation of the sympathetic nervous system potentially causing RyR1 hyperphosphorylation and intracellular Ca²⁺ leak. In skeletal muscles, intracellular Ca²⁺ leak gradually causes a myopathy characterized by significantly reduced duration and maximal power of peak performance as well as accelerated fatigue by additional ATP consumption of SR Ca²⁺ ATPase pumps that compensate for uncontrolled SR Ca²⁺ leak. SR Ca²⁺ leak is unique since it is a direct cause of muscle fatigue intrinsic to myofibers which is not reversible in the acute setting. A drug like any RyCal compound which fixes the SR Ca²⁺ leak by binding calstabin1 to the channel and stabilizing the closed state even during stress therefore helps to prevent accelerated fatigue development and promotes longer performance despite sustained stress (Wehrens, 2005). The pharmacotherapy is unique since it targets a central fatigue mechanism and potentially prevents toxic effects of intracellular Ca²⁺ leak. Moreover the molecular mechanism of this pharmocotherapy is unique, since it treats a specific defect contributing to muscle fatigue and since the mechanism of RyCal action is stabilization of normal RyR1 channel closure by increasing the calstabin1 binding affinity, which is distinct from historical approaches that block ion channel function.

More recently, SR Ca²⁺ leak was documented in myofibers following intense exercise and in a model of muscular dystrophy, (Wang et al., 2005), possibly due to defective skeletal ryanodine receptors (RyR1 s). Also, chronic activation of the sympathetic nervous system (SNS) in the context of heart failure promotes intrinsic skeletal muscle (SM) fatigue due to depletion of the phosphodiesterease PDE4D3 from the RyR1 complex, RyR1 PKA hyperphosphorylation at Serine 2844, calstabin1 depletion from the RyR1 complex, and a gain-of-function channel defect (Reiken et al., 2003). RyR1 dysfunction in the skeletal muscle leads to altered local subcellular Ca²⁺ release events and impaired global calcium transients (Ward et al., 2003). In the context of chronic exercise, there is evidence indicating that changes in the RyR1 macromolecular complex, namely depletion of PDE4D3 from the RyR1 complex, RyR1 PKA hyperphosphorylation at Serine 2844, and calstabin1 depletion from the RyR1 complex are related in a time-dependent and activity-dependent manner with repeated intense exercise in a mouse model. These biochemical changes in the RyR1 macromolecular complex regulation and function are stable following prolonged exercise and recover slowly over days to weeks. Thus RyR1 Ca²⁺ leak limits peak muscle performance and mediates muscle damage during prolonged, stressful exercise.

Molecular Mechanisms of Muscle Fatigue

The hypotheses that muscle fatigue is due to lactic acid accumulation in the cytoplasm and potassium ion accumulation in T-tubules have largely been set aside and attention has shifted to the study of metabolic and mitochondrial regulation and signaling pathways during chronic exercise (Lin, Wu et al. 2002; Wu, Kanatous et al. 2002; Wang, Zhang et al. 2004). These alternative explanations, while important, are unlikely to directly address the underlying abnormalities in ECC observed in fatigued muscle (Berchtold, Brinkmeier et al. 2000). Described herein is the regulation of the skeletal calcium release channel, RyR1, during chronic or high intensity exercise. The remodeling of the RyR1 macromolecular complex during chronic exercise, consisting of PKA hyperphosphorylation at Ser2844, PDE4D3 depletion, and calstabin1 depletion, likely plays a role in determining muscle fatigue during chronic exercise.

Exercise promotes numerous positive effects on an organism, from improvement in cardiovascular performance to increased glucose uptake and normalization of fuel metabolism (Goodyear and Kahn 1998; Pollock, Franklin et al. 2000). In heart failure, light exercise training has been shown to improve skeletal muscle strength and reduce fatigue, perhaps through adaptation to more aerobic muscle properties (Minotti, Johnson et al. 1990; Lunde, Sjaastad et al. 2001; Meyer 2006). On the other hand, high intensity exercise, such as that performed by a marathon runner or a long distance cyclist results in significant muscle damage and can impair task performance for days or weeks after a single event (O'Reilly, Warhol et al. 1987; Balnave and Thompson 1993; Komulainen and Vihko 1994).

Described herein is also a mouse model of intense physiological exercise to examine the changes in RyR1 function and ECC experienced by elite athletes, soldiers, or others under intense stressful activity. By combining daily swimming with level treadmill running assays, a physiological exercise regimen was constructed that did not exclusively involve isometric or eccentric contraction of the hind limb. While this resulted in less dramatic evidence of exercise-induced muscle damage than pure eccentric contractions, the data presented are more readily generalized.

Biochemical changes were identified in the RyR1 macromolecular complex consistent with leaky calcium release channels. Single channel bilayer data confirmed a leaky phenotype of the RyR1 channels from chronically exercised hind limb muscle, with elevated open probabilities in the chronically exercised group at resting calcium levels compared to sedentary controls. In two mouse genetic models replicating aspects of the biochemical changes in the RyR1 complex, namely muscle-specific deficiency of calstabin1 (cal1−/−) and deficiency of PDE4D3 (PDE4D−/−), exercise defects were identified. The role of calstabin1 depletion was assessed in another way by pharmacologically rebinding the stabilizing subunit to RyR1 with the Ca²⁺ channel stabilizer S107. Calstabin1 rebinding to RyR1, induced by S107 resulted in improved exercise capacity, as measured by treadmill failure times, over the same 21 day time course that depleted calstabin1 in the vehicle treated mice. The lack of an effect of S107 on cal1−/− mice provides evidence that the molecular mechanism of S107 is indeed through calstabin1 rebinding to RyR1.

In vitro fatigue protocols on intact isolated muscles suffer from the limitation that force declines are largely limited by hypoxia (Zhang, Bruton et al. 2006). Therefore, single FDB muscle fibers were isolated from sedentary and chronically exercised mice with and without S107 for assessment of the decline in tetanic Ca²⁺ during fatigue. Exercised fibers with calstabin rebound were relatively protected against fatigue (FIG. 48). The effect of S107 did not appear to be due to a shift in the fiber kinetics to slower calcium cycling.

S107 corrected the leak in RyR1 from chronically exercised mice as measured in a lipid bilayer at low resting Ca²⁺ levels. Ca²⁺ leak resulting from the overactive skeletal ryanodine receptors was not directly visualized in isolated muscle fibers, as calcium sparks were infrequent under all conditions tested, which is consistent with most reports that sparks in skeletal muscle are rare except under certain highly pathological conditions such as hypoosmotic shock or muscular dystrophy (Isaeva, Shkryl et al. 2005; Rios 2005; Wang, Weisleder et al. 2005).

Numerous hypotheses present themselves for how alterations in RyR1 Ca²⁺ leak could result in muscle damage. These data do not identify one muscle damage pathway solely responsible for the physiological effects seen, however, they implicate a role for calpain activation during chronic, and/or high intensity exercise. Several groups have demonstrated that calpain activation is a major mechanism for exercise-induced muscle damage (Belcastro 1993; Spencer and Mellgren 2002). As described herein, calpain activation in isolated EDL muscle was elevated following chronic exercise, but reduced by treatment with S107, suggesting that correction of the leaky RyR1 may protect against calpain activation (FIG. 50). With a potential contribution of other Ca²⁺-dependent pathways such as caspases, calmodulin, or calmodulin-dependent kinases to the damage induced by leaky ryanodine receptors, the present data suggest a mechanism by which local elevation of cytosolic Ca²⁺ could lead to damage. The hypothesis that ryanodine receptor-induced leak can cause muscle damage was further supported by evidence of reduced muscle damage, as measured by serum creatine kinase, in the S107 treated mice (FIG. 50). The data described herein shows that changes in the RyR1 macromolecular complex produces a leaky phenotype during chronic, high intensity exercise which impairs exercise performance.

Neuropathies

In one aspect, the present invention is directed to compositions and methods for the treatment and prevention of neuropathies. The term “neuropathy” as used herein refers to conditions characterized by damage to the nerves, including, but not limited to, damage caused by infections, inflammatory processes, exposure to toxins, treatment with drugs, nutritional deficiency, trauma, pressure on a nerve, neuronal death, neuronal degeneration, and heritable conditions. Although the term “neuropathy” is most frequently used to refer to conditions characterized damage to the peripheral nerves, i.e. “peripheral neuropathies”, as used herein, the term “neuropathy” includes both peripheral neuropathies and neuropathies affecting nerves of the central nervous system, i.e. “central neuropathies.”

There are various sub-classifications of neuropathies. For example, neuropathies may be classified as either peripheral or central, as either acute or chronic, or as either demyelinating or axonal. Neuropathies may also be classified according to the number of nerves that they affect. A neuropathy may involve damage to only a single nerve or nerve group (referred to as mononeuropathies) or may affect multiple nerves (polyneuropathies).

Peripheral neuropathies may be caused by hereditable disorders, systemic or metabolic disorders, dietary deficiencies, exposure to toxic substances, treatment with drugs, infection, inflammatory response, autoimmune diseases, and multiple other factors. Also, many peripheral neuropathies are of unknown etiology.

Examples of hereditable peripheral neuropathies include, but are not limited to, Charcot-Marie-Tooth disease (CMT) and Friedreich's ataxia.

Examples of peripheral neuropathies caused by systemic or metabolic disorders include, but are not limited to diabetic neuropathy.

Examples of peripheral neuropathies caused by dietary deficiencies include, but are not limited to neuropathy caused by vitamin B-12 deficiency, and neuropathy caused by thiamine deficiency.

Examples of peripheral neuropathies caused by exposure to toxic substances include, but are not limited to neuropathy caused by excessive alcohol use (“alcoholic neuropathy”), neuropathy caused by memia (such as in kidney failure patients), neuropathy caused by arsenic, neuropathy caused by nitrous oxide, neuropathy caused by industrial agents especially solvents, neuropathy caused by heavy metal exposure (such as lead, arsenic, mercury, and the like).

Examples of peripheral neuropathies caused by infectious agents and/or inflammatory or autoimmune processes include, but are not limited to, neuropathies caused by GullainBarre syndrome, polyarteritis nodosa, sarcoidosis, systemic lupus erythematosus, rheumatoid arthritis, sjogren syndrome, HIV infection, syphhilis infection, herpes infection, hepatitis infection, colorado tick fever infection, diptheria infection, leprosy, Lyme disease, and amyloidosis.

Examples of peripheral neuropathies caused by drugs include, but are not limited to neuropathy caused by amiodarone, hydralazine, perhexiline, chemotherapeutic drugs, vincristine, cisplatin, metronidazole (Flagy1), nitrofurantoin, thalidomide, INH (isoniazid), Dapsone, anticonvulsants, Phenytoin, Disulfiram, zidovudine, retrovir, AZT, didanosine (Videx), stavudine (Zerit), zalcitabine (Hivid), ritonavir (Norvir), amprenavir (Agenerase), lovastatin (Mevacor), indapamid (Lozol), gemfibrozil (Lopid).

Other miscellaneous causes or peripheral neuropathy include, but are not limited to ischemia, prolonged exposure to cold temperature, prolonged pressure on, or compression of a nerve, and trauma.

Peripheral neuropathies are characterized by damage to the either the sensory, motor, or autonomic peripheral nerves. The symptoms and effects of peripheral neuropathies depend on the types of nerves affected. Damage to such nerves can result in one or more of pain (neuropathic pain), loss of sensation, and loss of muscular control, abnormal blood pressure, abnormal heart function, digestion problems, and the like.

Damage to sensory fibers may result in changes in sensation, burning sensations, nerve pain (neuralgia, neuropathic pain), tingling, numbness, inability to determine joint position, and incoordination. Damage to the motor fibers may affect muscle control and can cause weakness, cramps, loss of muscle bulk, and loss of dexterity, paralysis, muscle atrophy, Muscle twitching (fasciculation), difficulty breathing or swallowing, falling. The autonomic nerves control involuntary and semi-voluntary functions, such as control of the internal organs, control of breathing, and blood pressure. Damage to autonomic nerves may cause, inability to regulate blood pressure, respiratory problems, problems of the digestive system (including nausea, vomiting, abdominal bloating, early satiety, diarrhea, constipation, unintentional weight loss), problems with the genitourinary system, (such as urinary incontinence, other bladder-function disorders, and male impotence.

Examples of specific nerves that may be affected in peripheral neuropathies include, but are not limited to, the axillary nerve, the brachial plexus, the peroneal nerve, the distal median nerve, the facial nerves palsy, the femoral nerves, the radial nerves, the sciatic nerve, the tibial nerves, and the ulnar nerves.

Examples of central neuropathies include, but are not limited to, vestibular neuropathies, optic neuropathies, optic nerve neuropathies, and retinal neuropathies. Other types of central neuropathy are known to those of skill in the art, and are encompassed by the present invention.

Seizures

The term “seizure” as used herein includes epileptic seizures and non-epileptic seizure. Epileptic seizures result from, temporary abnormal electrical activity in the brain. They can manifest as an alterations tonic or chronic movements, convulsions, sudden and involuntary contraction of a group of muscles, involuntary changes in body movement or function, numbness, alterations in mental state, alterations in sensation, alterations in awareness, changes in behavior, temporary loss of memory, visual disturbances, and various other symptoms. Symptoms experienced by a person during a seizure depend on where in the brain the disturbance in electrical activity occurs.

There are various different types of seizures, all of which are within the scope of the present invention. For example, seizures may be epileptic or non-epileptic, as described below. Seizures may also be classified according to whether the source of the seizure within the brain is localized (partial or focal onset seizures) or distributed (generalized seizures).

Partial seizures are further divided on the extent to which consciousness is affected. If consciousness is unaffected the seizure is referred to as a simple partial seizure. If consciousness is affected, the seizure is referred to as a complex partial seizure. A partial seizure may also spread within the brain—a process known as secondary generalization.

Generalized seizures are divided according to the effect on the body but all involve loss of consciousness. These include absence, myoclonic, clonic, tonic, tonic-clonic, and atonic seizures. In the past, seizures have also been classified as “petit mal”, “grand mal”, “Jacksonian”, “psychomotor”, and “temporal-lobe” seizures.

Epilepsy is a chronic neurological condition characterized by recurrent unprovoked seizures. These seizures involve abnormal, rhythmic discharges of cortical neurons. Epilepsy may be symptomatic or idiopathic. Symptomatic epilepsies are caused by structural or metabolic abnormality in the brain, which may be the result of factors such as genetic disorders (such as tuberous sclerosis or ring chromosome 20 syndrome), stroke, head injury, bacterial or viral encephalitis, alcohol use. There are several syndromes that associated with epilepsy, including, but not limited to, infantile spasms (West syndrome), benign childhood epilepsy with centro-temporal spikes (or benign rolandic epilepsy), benign childhood epilepsy with occipital paroxysms, juvenile myoclonic epilepsy (JME), temporal lobe epilepsy, frontal lobe epilepsy, Lennox-Gastaut syndrome, occipital lobe epilepsy, and fetal alcohol spectrum disorder (F ASD). Idiopathic seizures are those for which no specific cause has been identified.

Certain triggers or environmental factors or can lead to an increased likelihood of seizures in subjects with epilepsy. Examples of such triggers include, but are not limited to, sleep, the transition between sleep and wakefulness, tiredness, illness, constipation, menstruation, stress, and alcohol consumption. It should also be noted that, even in epileptic subjects, seizures may be triggered by some of the same specific events that cause “provoked” seizures in non-epileptic subjects.

Non-epileptic seizures appear outwardly similar to epileptic seizures but do not involve abnormal, rhythmic discharges of cortical neurons. Non-epileptic seizures are typically provoked by either physiological or psychological conditions. Seizures caused by psychological conditions are referred to as “psychogenic” non-epileptic seizures.

Causes of non-epileptic or “provoked” seizures include, but are not limited to, head injury, intoxication with drugs, drug toxicity (for example aminophylline or local anaesthetic toxicity, drugs that lower the seizure threshold (such as tricyclic antidepressants), infection (such as encephalitis or meningitis), fever leading to febrile convulsions, metabolic disturbances such as hypoglycaemia or hypoxia, withdrawal from drugs (such as anticonvulsants, sedatives, alcohol, barbiturates, and benzodiazepines), brain tumors, other brain lesions, eclampsia during pregnancy, photosensitivity, flashing or flickering lights and electroconvulsive therapy (ECT). It should be noted that the above stimuli may also trigger epileptic seizures.

Cognitive Disorders

In another aspect, the present invention is directed to the treatment and prevention of cognitive disorders, and also to methods and compositions for improvement of cognitive function more generally, even in the absence of a specific cognitive disorder. For example, improvement of cognitive function to combat the normal cognitive decline associated with aging, or to enhance cognitive function for other reasons, is encompassed by the present invention.

The terms “cognitive function” and “cognitive process” as used herein, include the mental processes of attention, learning and memory, perception, language skills, problem solving skills, and other type of cognitive function known to those of skill in the art. The terms “cognitive disorder,” “cognitive disease,” and “cognitive condition,” as used herein, refer to situations in which processes are disrupted or abnormal. The term “cognitive disorder,” as used herein encompasses all of the cognitive disorders described below and also all other cognitive disorders known to those of skill in the art. Types of cognitive disorders that are within the scope of the invention include, but are not limited to, dementias, delirium, amnesias, post-traumatic stress disorder and stress-induced cognitive dysfunction.

The term “dementia” as used herein refers to decline in cognitive function due to damage or disease in the brain or central nervous system beyond that which might be expected from normal aging. Dementias typically affect cognitive functions such as learning, memory, attention, language skills, and problem solving skills. Types and causes of dementia include, but are not limited to, chronic diseases such as cancer, Alzheimer's disease, vascular dementia (also known as multi-infarct dementia), Binswanger's disease, dementia with Lewy bodies (DLB), alcohol-induced persisting dementia, frontotemporal lobar degenerations (FTLD), Pick's disease, frontotemporal dementia (or frontal variant FTLD), semantic dementia (or temporal variant FTLD), progressive non-fluent aphasia, Creutzfeldt-lakob disease, Huntington's disease, Parkinson's disease, and AIDS dementia complex.

Other types of cognitive disorders that may be treated with the methods and compositions of the present invention include the various attention disorders. Attention Deficit/Hyperactivity Disorder (ADHD; ADH is also referred to as Attention-deficit syndrome (ADS)) is a neurological disorder initially appearing in childhood which manifests itself with symptoms such as hyperactivity, forgetfulness, poor impulse control, and distractibility. In neurological terms, ADHD is currently considered to be a persistent and chronic syndrome for which no medical cure is available. ADHD is believed to affect between 3-5% of the United States population, including both children and adults. ADH D is sometimes referred to as ADD when only inattentiveness and distractibility are problematic. ADHD can be classified into three subtypes: predominantly inattentive (sometimes referred to as ADD), predominantly hyperactive-impulsive, and combined. Those presenting impairing symptoms of ADHD who do not fully fit the criteria for any of the three subtypes can be diagnosed with “ADHD Not Otherwise Specified.” The symptoms of ADHD are given the name “Hyperkinetic disorders”. When a conduct disorder is present, the condition is referred to as “Hyperkinetic conduct disorder”. All of the above conditions are within the scope of the present invention.

In one embodiment, the cognitive disorder is not Alzheimer's Disease. In another embodiment, the cognitive disorder is not memory loss. In another embodiment, the cognitive disorder is not age-dependent memory loss.

Prevention and Treatment

In one embodiment, the present invention provides compositions and methods that are useful for treating and/or preventing conditions affecting the nervous system, such as neuropathies, seizures and cognitive disorders.

In certain embodiments, the compositions and methods of the present invention may be used preventively in subjects who are not yet suffering from neuropathies, seizures or cognitive disorders, but whom exhibit one or more “risk factors” or are otherwise predisposed to the development of neuropathies, seizures or cognitive disorders.

Subjects

In preferred embodiments, the compositions described herein are administered therapeutically or prophylactically to subjects who are suffering from, or at risk of developing a disease, disorder or condition affecting the nervous system, such as a neuropathy, seizures or a cognitive disorder. Such a subject may be any animal. For example, in one embodiment, the subject is a mammal. Examples of mammals that may be treated using the methods and compositions of the invention include, but are not limited to, primates, rodents, ovine species, bovine species, porcine species, equine species, feline species and canine species. In preferred embodiments the subjects are human.

In preferred embodiments, the methods and compositions of the invention may be used to treat or prevent a disease, disorder or condition affecting the nervous system, such as a neuropathy, seizures or a cognitive disorder, in a subject having a mutation in a ryanodine receptor gene, such as a mutation that results in defective functioning of the ryanodine receptor, such as an increased open probability or “leakiness” of the ryanodine receptor. In other embodiments, the “subjects” of the present invention may also be in vitro or in vivo systems, including, without limitation, isolated or cultured cells or tissues, in vitro assay systems.

Throughout the specifications, groups and substituent's thereof may be chosen to provide stable moieties and compounds.

The present invention provides compounds that are capable of treating and preventing disorders and diseases associated with the RyR receptors that regulate calcium channel functioning in cells. More particularly, the present invention provides compounds that are capable of treating or preventing a leak in RyR channels. “Disorders and diseases associated with the RyR receptors” means disorders and diseases that can be treated and/or prevented by modulating the RyR receptors that regulate calcium channel functioning in cells. “Disorders and diseases associated with the RyR receptors” include, without limitation, cardiac disorders and diseases, skeletal muscular disorders and diseases, cognitive disorders and diseases, malignant hyperthermia, diabetes, and sudden infant death syndrome. Cardiac disorder and diseases include, but are not limited to, irregular heartbeat disorders and diseases; exercise-induced irregular heartbeat disorders and diseases; sudden cardiac death; exercise-induced sudden cardiac death; congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure. Irregular heartbeat disorders and diseases include and exercise-induced irregular heartbeat disorders and diseases include, but are not limited to, atrial and ventricular arrhythmia; atrial and ventricular fibrillation; atrial and ventricular tachyarrhythmia; atrial and ventricular tachycardia; catecholaminergic polymorphic ventricular tachycardia (CPVT); and exercise-induced variants thereof. Skeletal muscular disorder and diseases include, but are not limited to, skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence. Cognitive disorders and diseases include, but are not limited to, Alzheimer's Disease, forms of memory loss, and age-dependent memory loss.

Compounds

In one embodiment, the present invention provides a method which comprises administering compounds of Formula I:

wherein, n is 0, 1, or 2; q is 0, 1, 2, 3, or 4; each R is independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —S(═O)alkyl, —OS(═O)₂CF₃, acyl, —O-acyl, alkyl, alkoxyl, alkylamino, alkylarylamino, alkylthio, cycloalkyl, alkylaryl, aryl, heteroaryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)arylthio, and (hetero-)arylamino; wherein each acyl, —O-acyl, alkyl, alkoxyl, alkylamino, alkylarylamino, alkylthio, cycloalkyl, alkylaryl, aryl, heteroaryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)arylthio, and (hetero-)arylamino may be optionally substituted; R₁ is selected from the group consisting of H, oxo, alkyl, alkenyl, aryl, alkylaryl, cycloalkyl, heteroaryl, and heterocyclyl; wherein each alkyl, alkenyl, aryl, alkylaryl, cycloalkyl, heteroaryl, and heterocyclyl may be optionally substituted; R₂ is selected from the group consisting of H, —C(═O)R₅, —C(═S)R₆, —SO₂R₇, —P(═O)R₈R₉, —(CH₂)_(m)—R₁₀, alkyl, aryl, alkylaryl, heteroaryl, cycloalkyl, cycloalkylalkyl, and heterocyclyl; wherein each alkyl, aryl, alkylaryl, heteroaryl, cycloalkyl, cycloalkylalkyl, and heterocyclyl may be optionally substituted; R₃ is selected from the group consisting of H, —CO₂Y, —C(C═O)NHY, acyl, —O-acyl, alkyl, alkenyl, aryl, alkylaryl, cycloalkyl, heteroaryl, and heterocyclyl; wherein each acyl, alkyl, alkenyl, aryl, alkylaryl, cycloalkyl, heteroaryl, and heterocyclyl may be optionally substituted; and wherein Y is selected from the group consisting of H, alkyl, aryl, alkylaryl, cycloalkyl, heteroaryl, and heterocyclyl, and wherein each alkyl, aryl, alkylaryl, cycloalkyl, heteroaryl, and heterocyclyl may be optionally substituted; R₄ is selected from the group consisting of H, alkyl, alkenyl, aryl, alkylaryl, cycloalkyl, heteroaryl, and heterocyclyl; wherein each alkyl, alkenyl, aryl, alkylaryl, cycloalkyl, heteroaryl, and heterocyclyl may be optionally substituted; R₅ is selected from the group consisting of —NR₁₅R₁₆, —(CH₂)_(t)NR₁₅R₁₆, —NHNR₁₅R₁₆, —NHOH, —OR₁₅, —C(═O)NHNR₁₅R₁₆, —CO₂R₁₅, —C(═O)NR₁₅R₁₆, —CH₂X, acyl, alkyl, alkenyl, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkyl, alkenyl, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl may be optionally substituted, and wherein t is 1, 2, 3, 4, 5, or 6; R₆ is selected from the group consisting of —OR₁₅, —NHNR₁₅R₁₆, —NHOH, —NR₁₅R₁₆, —CH₂X, acyl, alkenyl, alkyl, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkyl, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl may be optionally substituted; R₇ is selected from the group consisting of —OR₁₅, —NR₁₅R₁₆, —NHNR₁₅R₁₆, —NHOH, —CH₂X, alkyl, alkenyl, alkynyl, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl; wherein each alkyl, alkenyl, alkynyl, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl may be optionally substituted; R₈ and R₉ independently are selected from the group consisting of OH, acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl may be optionally substituted; R₁₀ is selected from the group consisting of —NR₁₅R₁₆, OH, —SO₂R₁₁, —NHSO₂R₁₁, C(═O)(R₁₂), NHC═O(R₁₂), —OC═O(R₁₂), and —P(═O)R₁₃R₁₄; R₁₁, R₁₂, R₁₃, and R₁₄ independently are selected from the group consisting of H, OH, NH₂, —NHNH₂, —NHOH, acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl may be optionally substituted; X is selected from the group consisting of halogen, —CN, —CO₂R₁₅, —C(═O)NR₁₅R₁₆, —NR₁₅R₁₆, —OR₁₅, —SO₂R₇, and —P(═O)R₈R₉; and R₁₅ and R₁₆ independently are selected from the group consisting of H, acyl, alkenyl, alkoxyl, OH, NH₂, alkyl, alkylamino, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, alkylaryl, cycloalkyl, cycloalkylalkyl, heteroaryl, heterocyclyl, and heterocyclylalkyl may be optionally substituted; and optionally R₁₅ and R₁₆ together with the N to which they are bonded may form a heterocycle which may be substituted; the nitrogen in the benzothiazepine ring may optionally be a quaternary nitrogen; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes, and prodrugs thereof;

provided that when q is 0 and n is 0, then R₂ is not H, Me, Et, —C(C═O)NH₂, —C(C═O)NHPh, —C(═S)NH-nButyl, —C(C═O)NHC(═O)CH₂Cl, —C(C═O)H, —C(C═O)Me, —C(C═O)Et, —C(C═O)CH═CH₂, —S(═O)₂Me, —S(═O)₂Et, —C(C═O)OC(CH₃)₃, or 9-β-D-ribofuranosyl-9H-purin-6-yl or —C(C═O)Ph;

further provided that when q is 0 and n is 1 or 2, then R₂ is not H, —C(C═O)Me, —C(C═O)Et, —S(═O)₂Me, —S(═O)₂Et or —C(C═O)OC(CH₃)₃;

further provided that when q is 1, and R is Me, Cl, CN or F at the 6 position of the benzothiazepine ring, or Br at position 7 of the benzothiazepine ring, then R₂ is not H, Me, —C(C═O)H, —C(C═O)Me, —C(C═O)Et, —C(C═O)Ph, —S(═O)₂Me, or —S(═O)₂Et;

further provided that when q is 1, n is 0, and R is OH, C₁-C₃ alkoxyl at the 7 position of the benzothiazepine ring, then R₂ is not H, —C(C═O)CH═CH₂, —C(C═O)CH₂Br, —(CH₂)₃-4-benzylpiperidine,

further provided that when q is 0, n is 0 or 2, R₁ is H or oxo, R₃ is H or Me and R₄ is H, then R₂ is not —C═ONHPh, —C═ONHCOCH₂Cl, —C═ONH₂, —C═ONH(n-Bu), —C═S(NHPh), —C═S(NHCOCH₂Cl), —C═S(NH₂), —C═SNH(n-Bu), —CH₂CH₂N(Me)₂, —CH₂CH₂NH₂ or —C═OCHCl₂;

further provided that when q is 2, each R is methoxy at positions 7 and 8 of the benzothiazepine ring, R₃ and R₄ are each H and n is 0 or 2, then R₁ is not methyl, —CH₂Ph or 3,4-dimethoxybenzyl, and R₂ is not —C(C═O)Me;

further provided that when q is 0, R₁, R₂ and R₄ are each H, then R₃ is not H or CH₃;

further provided that when q is 0, R₂ is H, —CH₂C(═O)OCH₃, —CH₂C(═O)NH₂, —C(C═O)—C₆H₄—Cl, —CH₂—C₆H₄—Cl, —(CH₂)₃-morpholino, —(CH₂)₃-4-methylpiperazino, —(CH₂)₂—C(C═O)OCH₃, 2,2′,3,3′-tetrahydro-4(5H)-1,4 benzothiazepine, or —CH₂-Ph, R₃ and R₄ are either H or CH₃ but not both CH₃, then R₁ is not oxo;

further provided that when q is 2, each R is methoxy at positions 7 and 8 or 7 and 9 of the benzothiazepine ring, R₁, R₂ and R₄ are each H and n is 0, then R₃ is not H;

further provided that when q is 0, R₁, R₃ and R₄ are each H and n is 0, then R₂ is not methyl, benzotriazolylmethyl, 4-methoxybenzyl, Ph-C≡C—CH₂—, 4-chlorobenzyl, ethyl, pentyl, —CH₂P(O)(OCH₂CH₃)₂, Ph-CO—CH₂CH₂—, C(═O)CH═CH₂ and C(═O)CH₂Br; and

further provided that when q is 1, R is CH₃ at position 9 of the benzothiazepine ring, R₁, R₃ and R₄ are each H and n is 0, then R₂ is not methyl, benzotriazolylmethyl, pentyl, —CH₂P(O)(OCH₂CH₃)₂ or 4-methoxybenzyl.

In one embodiment, the present invention provides compounds of Formula I, as described above, with the proviso that said compound is not S24 or S68.

In one embodiment, the present invention provides compounds of Formula I-a:

wherein: n is 0, 1, or 2; q is 0, 1, 2, 3, or 4; each R is independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —S(═O)alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; wherein each acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino may be substituted or unsubstituted; R₂ is selected from the group consisting of H, —C═O(R₅), —C═S(R₆), —SO₂R₇, —P(═O)R₈R₉, —(CH₂)_(m)—R₁₀, alkyl, aryl, heteroaryl, cycloalkyl, cycloalkylalkyl, and heterocyclyl; wherein each alkyl, aryl, heteroaryl, cycloalkyl, cycloalkylalkyl, and heterocyclyl may be substituted or unsubstituted; R₅ is selected from the group consisting of —NR₁₅R₁₆, —NHNR₁₅R₁₆, —NHOH, —OR₁₅, —C(═O)NHNR₁₅R₁₆, —CO₂R₁₅, —C(═O)NR₁₅R₁₆, —CH₂X, acyl, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; R₆ is selected from the group consisting of —OR₁₅, —NHNR₁₅R₁₆, —NHOH, —NR₁₅R₁₆, —CH₂X, acyl, alkenyl, alkyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; R₇ is selected from the group consisting of H, —OR₁₅, —NR₁₅R₁₆, —NHNR₁₅R₁₆, —NHOH, —CH₂X, alkyl, alkenyl, alkynyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each alkyl, alkenyl, alkynyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; R₈ and R₉ independently are selected from the group consisting of —OH, acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; R₁₀ is selected from the group consisting of —NR₁₅R₁₆, OH, —SO₂R₁₁, —NHSO₂R₁₁, —C(═O)R₁₂, —NH(C═O)R₁₂, —O(C═O)R₁₂, and —P(═O)R₁₃R₁₄; m is 0, 1, 2, 3, or 4; R₁₁, R₁₂, R₁₃, and R₁₄ independently are selected from the group consisting of H, OH, NH₂, —NHNH₂, —NHOH, acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; X is selected from the group consisting of halogen, —CN, —CO₂R₁₅, —C(═O)NR₁₅R₁₆, —NR₁₅R₁₆, —OR₁₅, —SO₂R₇, and —P(═O)R₈R₉; and R₁₅ and R₁₆ independently are selected from the group consisting of H, acyl, alkenyl, alkoxyl, OH, NH₂, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; and optionally R₁₅ and R₁₆ together with the N to which they are bonded may form a heterocycle which may be substituted or unsubstituted; the nitrogen in the benzothiazepine ring may be optionally a quaternary nitrogen; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes, and prodrugs thereof;

provided that when q is 0 and n is 0, then R₂ is not H, Me, Et, —C(C═O)NH₂, —C(C═O)NHPh, —C(═S)NH-nButyl, —C(C═O)NHC(═O)CH₂Cl, —C(C═O)H, —C(C═O)Me, —C(C═O)Et, —C(C═O)CH═CH₂, —S(═O)₂Me, —S(═O)₂Et, —C(C═O)O(CH₃)₃, or 9H-D-ribofuranosyl-9H-purin-6-yl or —C(C═O)Ph; further provided that when q is 0 and n is 1 or 2, then R₂ is not H, —C(C═O)Me, —C(C═O)Et, —S(═O)₂Me, —S(═O)₂Et or —C(C═O)O(CH₃)₃;

further provided that when q is 1, and R is Me, Cl, CN or F at the 6 position of the benzothiazepine ring, or Br at position 7 of the benzothiazepine ring, then R₂ is not H, Me, —C(C═O)H, —C(C═O)Me, —C(C═O)Et, —C(C═O)Ph, —S(═O)₂Me, or —S(═O)₂Et;

further provided that when q is 1, n is 0, and R is OH, C₁-C₃ alkoxyl at the 7 position of the benzothiazepine ring, then R₂ is not H, —C(C═O)CH═CH₂, —C(C═O)CH₂Br, —(CH₂)₃-4-benzylpiperidine,

further provided that when q is 0 and n is 0 or 2, then R₂ is not —C═ONHPh, —C═ONHCOCH₂Cl, —C═ONH₂, —C═ONH(n-Bu), —C═S(NHPh), —C═S(NHCOCH₂Cl), —C═S(NH₂), —C═SNH(n-Bu), —CH₂CH₂N(Me)₂, —CH₂CH₂NH₂ or —C═OCHCl₂;

further provided that when q is 2, each R is methoxy at positions 7 and 8 of the benzothiazepine ring, and n is 0 or 2, then R₂ is not —C(C═O)Me;

further provided that when q is 0, R₂ is not H;

further provided that when q is 0, and n is 0, then R₂ is not methyl, benzotriazolylmethyl, 4-methoxybenzyl, Ph-C≡C—CH₂—, 4-chlorobenzyl, ethyl, pentyl, —CH₂P(O)(OCH₂CH₃)₂, Ph-CO—CH₂CH₂—, C(═O)CH═CH₂ and C(═O)CH₂Br; and

further provided that when q is 1, R is CH₃ at position 9 of the benzothiazepine ring, and n is 0, then R₂ is not methyl, benzotriazolylmethyl, pentyl, —CH₂P(O)(OCH₂CH₃)₂ or 4-methoxybenzyl.

In certain embodiments, the present invention provides compounds of formula I-a, wherein each R is independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1, or 2.

In other embodiments, the present invention provides compounds of formula I-a, wherein R₂ is selected from the group consisting of —C═O(R₅), —C═S(R₆), —SO₂R₇, —P(═O)R₈R₉, and —(CH₂)_(m)—R₁₀.

In yet another embodiment, the present invention provides compounds of formula I-b:

wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —S(═O)alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; and wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio may be substituted or unsubstituted; R₂ and n are as defined in compounds of formula I-a above; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-b, wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R′ is H or OMe, and R″ is H.

In other embodiments, the present invention provides compounds of formula I-b, wherein R₂ is selected from the group consisting of —C═O(R₅), —C═S(R₆), —SO₂R₇, —P(═O)R₈R₉, and —(CH₂)_(m)—R₁₀.

In yet another embodiment, the present invention provides compounds formula of I-c:

wherein each R, R₇, q, and n is as defined in compounds of formula I-a above; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-c, wherein each R is independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1, or 2.

In other embodiments, the present invention provides compounds of formula I-c, wherein R₇ is selected from the group consisting of —OH, —NR₁₅R₁₆, alkyl, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each alkyl, akenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted.

In a further embodiment, the present invention provides compounds of formula of I-d:

wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —S(═O)alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; and wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio may be substituted or unsubstituted; R₇ and n are as defined in compounds of formula I-a above; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-d, wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R′ is H or OMe, and R″ is H.

In other embodiments, the present invention provides compounds of formula I-d, wherein R₇ is selected from the group consisting of —OH, —NR₁₅R₁₆, alkyl, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each alkyl, akenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted.

In one embodiment, the present invention provides compounds of formula of I-e:

wherein each R, R₅, q and n is as defined compounds of formula I-a above; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-e, wherein each R is independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1, or 2.

In other embodiments, the present invention provides compounds of formula I-e, wherein R₅ is selected from the group consisting of —NR₁₅R₁₆, —NHOH, —OR₁₅, —CH₂X, alkyl, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkyl, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted.

In some embodiments, the present invention provides compounds of formula I-e, wherein R₅ is an alkyl substituted by at least one labeling group, such as a fluorescent, a bioluminescent, a chemiluminescent, a colorimetric and a radioactive labeling group. A fluorescent labeling group can be selected from bodipy, dansyl, fluorescein, rhodamine, Texas red, cyanine dyes, pyrene, coumarins, Cascade Blue™, Pacific Blue, Marina Blue, Oregon Green, 4′,6-Diamidino-2-phenylindole (DAPI), indopyra dyes, lucifer yellow, propidium iodide, porphyrins, arginine, and variants and derivatives thereof.

In another embodiment, the present invention provides compounds of formula of I-f:

wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —S(═O)alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; and wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio may be substituted or unsubstituted; R₅ and n are as defined in compounds of formula I-a above; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-f, wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R′ is H or OMe, and R″ is H.

In other embodiments, the present invention provides compounds of formula I-f, wherein R₅ is selected from the group consisting of —NR₁₅R₁₆, —NHOH, —OR₁₅, —CH₂X, alkyl, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkyl, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted.

In yet another embodiment, the present invention provides compounds of formula of I-g:

wherein W is S or O; each R, R₁₅, R₁₆, q, and n is as defined in compounds of formula I-a above; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-g, wherein each R is independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1, or 2.

In other embodiments, the present invention provides compounds of formula I-g, wherein R₁₅ and R₁₆ independently are selected from the group consisting of H, OH, NH₂, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted; and optionally R₁₅ and R₁₆ together with the N to which they are bonded may form a heterocycle which may be substituted.

In some embodiments, the present invention provides compounds of formula I-g, wherein W is O or S.

In yet another embodiment, the present invention provides compounds of formula of I-h:

wherein W is S or O; wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —S(═O)alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; and wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio may be substituted or unsubstituted; R₁₅, R₁₆ and n are as defined in compounds of formula I-a above; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-h, wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R′ is H or OMe, and R″ is H.

In other embodiments, the present invention provides compounds of formula I-h, wherein R₁₅ and R₁₆ independently are selected from the group consisting of H, OH, NH₂, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted; and optionally R₁₅ and R₁₆ together with the N to which they are bonded may form a heterocycle which may be substituted.

In some embodiments, the present invention provides compounds of formula I-g, wherein W is O or S.

In a further embodiment, the present invention provides compounds of formula of I-i:

wherein R₁₇ is selected from the group consisting of —NR₁₅R₁₆, —NHNR₁₅R₁₆, —NHOH, —OR₁₅, —CH₂X, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; each R, q, and n is as defined in compounds of formula I-a above; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-i, wherein each R is independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1, or 2.

In other embodiments, the present invention provides compounds of formula I-i, wherein R₁₇ is —NR₁₅R₁₆, and —OR₁₅. In certain other embodiments, R₁₇ is —OH, —OMe, —NEt, —NHEt, —NHPh, —NH₂, or —NHCH₂pyridyl.

In one embodiment, the present invention provides compounds of formula of I-j:

wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(O)₂alkyl, —S(═O)alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; and wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio may be substituted or unsubstituted; R₁₇ is selected from the group consisting of —NR₁₅R₁₆, —NHNR₁₅R₁₆, —NHOH, —OR₁₅, —CH₂X, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; n is as defined in compounds of formula I-a; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-j, wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R′ is H or OMe, and R″ is H.

In other embodiments, the present invention provides compounds of formula I-j, wherein R₁₇ is —NR₁₅R₁₆ or —OR₁₅. In certain other embodiments, R₁₇ is —OH, —OMe, —NEt, —NHEt, —NHPh, —NH₂, or —NHCH₂pyridyl.

In another embodiment, the present invention provides compounds of formula I-k or I-k-1:

wherein R, R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —S(═O)alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; and wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio may be substituted or unsubstituted; R₁₈ is selected from the group consisting of —NR₁₅R₁₆, —C(═O)NR₁₅R₁₆, —(C═O)OR₁₅, —OR₁₅, alkyl, aryl, cycloalkyl, heterocyclyl, and at one labeling group; wherein each alkyl, aryl, cycloalkyl, and heterocyclyl may be substituted or unsubstituted; wherein q is 0, 1, 2, 3, or 4; p is 1, 2, 3, 4, 5, 6, 7, 8 9, or 10; and n is 0, 1, or 2; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof

In certain embodiments, the present invention provides compounds of formula I-k, wherein each R is independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R is H or is OMe at position 7 of the benzothiazepine ring.

In certain embodiments, the present invention provides compounds of formula I-k-1, wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R′ is H or OMe, and R″ is H.

In other embodiments, the present invention provides compounds of formula I-k or I-k-1, wherein R₁₈ is selected from the group consisting of —NR₁₅R₁₆, —(C═O)OR₁₅, —OR₁₅, alkyl, aryl, and at one labeling group; and wherein each alkyl and aryl may be substituted or unsubstituted. In some cases, m is 1, and R₁₈ is Ph, C(═O)OMe, C(═O)OH, aminoalkyl, NH₂, NHOH, or NHCbz. In other cases, m is 0, and R₁₈ is C₁-C₄ alkyl, such as Me, Et, propyl, and butyl. In yet other cases, m is 2, and R₁₈ is pyrrolidine, piperidine, piperazine, or morpholine. In some embodiments, m is 3, 4, 5, 5, 7, or 8, and R₁₈ is a fluorescent labeling group selected from bodipy, dansyl, fluorescein, rhodamine, Texas red, cyanine dyes, pyrene, coumarins, Cascade Blue™, Pacific Blue, Marina Blue, Oregon Green, 4′,6-Diamidino-2-phenylindole (DAPI), indopyra dyes, lucifer yellow, propidium iodide, porphyrins, arginine, and variants and derivatives thereof

In yet another embodiment, the present invention provides compounds of formula of I-l or I-l-1:

wherein R, R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —S(═O)alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; and wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio may be substituted or unsubstituted; R₆ and n and q are as defined in compounds of formula I-a; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-l, wherein each R is independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R is H or is OMe at position 7 of the benzothiazepine ring.

In certain embodiments, the present invention provides compounds of formula I-l-1, wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R′ is H or OMe, and R″ is H.

In other embodiments, the present invention provides compounds of formula I-l or I-l-1, wherein R₆ is selected from the group consisting of —NR₁₅R₁₆, —NHNR₁₅R₁₆, —OR₁₅, —NHOH, —CH₂X, acyl, alkenyl, alkyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted. In some cases, R₆ is —NR₁₅R₁₆ such as —NHPh, pyrrolidine, piperidine, piperazine, morpholine, and the like. In some other cases, R₆ is alkoxyl, such as —O-tBu.

In a further embodiment, the present invention provides compounds of formula I-m or I-m-1:

wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —S(═O)alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; and wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio may be substituted or unsubstituted; wherein R₈, R₉ 1 and n are as defined in compounds of formula I-a above; and enantiomers, diastereomers, tautomers, pharmaceutically acceptable salts, hydrates, solvates, complexes and prodrugs thereof.

In certain embodiments, the present invention provides compounds of formula I-m, wherein each R is independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R is H or is OMe at position 7 of the benzothiazepine ring.

In certain embodiments, the present invention provides compounds of formula I-m-1, wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, —OC(═O)Me, morpholinyl and propenyl; and n is 0, 1 or 2. In some cases, R′ is H or OMe, and R″ is H.

In other embodiments, the present invention provides compounds of formula I-m or I-m-1, wherein R₈ and R₉ are independently alkyl, aryl, —OH, alkoxyl, or alkylamino. In some cases, R₈ is C₁-C₄alkyl such as Me, Et, propyl and butyl; and R₉ is aryl such as phenyl.

In other embodiments, the present invention provides compounds of formula I-n,

wherein:

R_(d) is CH₂, or NR_(a); and

R_(a) is H, alkoxy (for example but not limited to methoxy), —(C₁-C₆ alkyl)-aryl, wherein the aryl is a bisubstituted phenyl or a benzo[1,3]dioxo-5-yl group, or a Boc group. In one embodiment, R_(a) is H.

Representative compounds of Formula I-n include without limitation S101, S102, S103, and S114.

In certain other embodiments, the invention provides compounds of Formula I-o:

wherein:

R_(e) is —(C₁-C₆ alkyl)-phenyl, —(C₁-C₆ alkyl)-C(O)R_(b), or substituted or unsubstituted —C₁-C₆ alkyl; and

R_(b) is —OH or —O—(C₁-C₆ alkyl), and

wherein the phenyl or substituted alkyl is substituted with one or more of halogen, hydroxyl, —C₁-C₆ alkyl, —O—(C₁-C₆ alkyl), —NH₂, —NH(C₁-C₆ alkyl), —N(C₁-C₆ alkyl)₂, cyano, or dioxolane.

Representative compounds of Formula I-o include without limitation S107, S110, S111, S120, and S121.

In certain other embodiments, the invention provides compounds of Formula I-p:

wherein:

R_(c) is —(C₁-C₆ alkyl)-NH₂, —(C₁-C₆ alkyl)-OR_(f), wherein R_(f) is H or —C(O)—(C₁-C₆)alkyl, or —(C₁-C₆ alkyl)-NHR_(g) wherein Rg is carboxybenzyl. Representative compounds of Formula I-n include without limitation S109, S122, and S123.

In non-limiting examples, Formulae I-a, I-b, I-e, I-f, I-g, I-h, I-n are represented by compounds S101, S102, S103. In a non-limiting example, Formulae I-a, I-b, I-e, I-f, I-i, I-j are represented by compound S104. In a non-limiting example, Formulae I-a, I-b, I-o are represented by S107. In a non-limiting example, Formulae I-a, I-b, I-e, I-f are represented by S108. In a non-limiting example, Formulae I-a, I-b, I-e, I-f, I-p are represented by S109. In a non-limiting example, Formulae I-a, I-b, I-k, I-k-1, I-o are represented by S110. In a non-limiting example, Formulae I-a, I-b, I-k, I-k-1 I-o are represented by S111. In a non-limiting example, Formulae I-a, I-b, I-c, I-d are represented by S112. In a non-limiting example, Formulae I-a, I-b are represented by S113. In a non-limiting example, Formulae I-a, I-b, I-e, I-f, I-g, I-h are represented by S114. In a non-limiting example, Formulae I-a, I-b, I-g, I-h, I-l and I-l-1 are represented by S115. In a non-limiting example, Formulae I-a, I-b, I-g, I-h, are represented by S116. In a non-limiting example, Formulae I-a, I-b, I-e, I-f are represented by S117. In a non-limiting example, Formulae I-a, I-b, I-e, I-f are represented by S118. In a non-limiting example, I-a, I-b are represented by S119. In a non-limiting example, Formulae I-a, I-b, I-k, I-k-1, I-o are represented by S120. In a non-limiting example, Formulae I-a, I-b, I-k, I-k-1 I-o, I-p are represented by S121. In a non-limiting example, Formulae I-a, I-b, I-e, I-f, I-p are represented by S122. In a non-limiting example, Formulae I-a, I-b, I-e, I-f, I-p are represented by S123.

The compounds of Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, and I-p, and Formula II can be used in methods that treat or prevent disorders and diseases associated with the RyR receptors.

Examples of such compounds include, without limitation, S1, S2, S3, S4, S5, S6, S7, S9, S11, S12, S13, S14, S19, S20, S22, S23, S24, S25, S26, S27, S36, S37, S38, S40, S43, S44, S45, S46, S47, S48, S49, S50, S51, S52, S53, S54, S55, S56, S57, S58, S59, S60, S61, S62, S63, S64, S66, S67, S68, S69, S70, S71, S72, S73, S74, S75, S76, S77, S78, S79, S80, S81, S82, S83, S84, S85, S86, S87, S88, S89, S90, S91, S92, S93, S94, S95, S96, S97, S98, S99, S100, S101, S102, S103, 5104, 5105, 5107, S108, S109, S110, S111, S112, S113, S114, S115, S116, S117, S118, S119, S120, S121, S122, and S123, as herein defined. In certain embodiments, the compounds are isolated and substantially pure.

In a certain embodiment of the methods the compound is not S4. In another embodiment, the compound is not S7. In another embodiment, the compound is not S8. In another embodiment, the compound is not S10. In another embodiment, the compound is not S20. In another embodiment, the compound is not S24. In another embodiment, the compound is not S25. In another embodiment, the compound is not S26. In another embodiment, the compound is not S27. In another embodiment, the compound is not S36. In another embodiment, the compound is not JTV-519.

Certain RyCal compounds of the invention have the following structures:

In one embodiment of the present invention, for compounds of Formula I, if R₂ is C═O(R₅) or SO₂R₇, then R is at positions 2, 3, or 5 on the benzene ring (i.e., positions 6, 7 or 9 of the benzothiazepine ring).

In another embodiment of the invention, for compounds of Formula I, if R₂ is C═O(R₅) or SO₂R₇, then each R is independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —N₃, —SO₃H, acyl, alkyl, alkylamino, cycloalkyl, heterocyclyl, heterocyclylalkyl, alkenyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, heterocyclyl, heterocyclylalkyl, alkenyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, —SH, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl.

In another embodiment of the invention, for compounds of Formula I, if R₂ is C═O(R₅) or SO₂R₇, then there are at least two R groups attached to the benzene ring. Furthermore, there are at least two R groups attached to the benzene ring, and both R groups are attached at positions 2, 3, or 5 on the benzene ring. Still furthermore, each R is independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —N₃, —SO₃H, acyl, alkyl, alkylamino, cycloalkyl, heterocyclyl, heterocyclylalkyl, alkenyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, heterocyclyl, heterocyclylalkyl, alkenyl, (hetero-)aryl, (hetero-) arylthio, and (hetero-)arylamino may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, —SH, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl.

In another embodiment of the invention, for compounds of Formula I, if R₂ is C═O(R₅), then R₅ is selected from the group consisting of —NR₁₆, NHNHR₁₆, NHOH, —OR₁₅, CONH₂NHR₁₆, CONR₁₆, CH₂X, acyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl.

In another embodiment, the present invention provides use of compounds of Formula II:

wherein R═OR′, SR′, N(R′)₂, alkyl, or halide and R′=alkyl, aryl, or H, and wherein R can be at position 2, 3, 4, or 5 (i.e., positions 6, 7, 8 or 9 of the benzothiazepine ring). Formula II is discussed also in co-pending application Ser. No. 10/680,988, the disclosure of which is incorporated herein in its entirety by reference.

Routes of Activity

The compounds of the invention reduce the open probability of RyR by increasing the affinity of FKBP12 (calstabin1) and FKBP12.6 (calstabin2) for, respectively PKA-phosphorylated RyR1 and PKA-phosphorylated RyR2. Moreover, the compounds of Formula I normalize gating of mutant RyR channels, including CPVT-associated mutant RyR2 channels, by increasing FKBP12 (calstabin1) and FKBP 12.6 (calstabin2) binding affinity. Therefore, the compounds of the invention prevent disorders and conditions involving modulation of the RyR receptors, particularly the RyR1 and RyR2 receptors. Examples of such disorders and conditions include, without limitation, cardiac disorders and diseases, skeletal muscular disorders and diseases, cognitive disorders and diseases, malignant hyperthermia, diabetes, and sudden infant death syndrome. Cardiac disorder and diseases include, but are not limited to, irregular heartbeat disorders and diseases; exercise-induced irregular heartbeat disorders and diseases; sudden cardiac death; exercise-induced sudden cardiac death; congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure. Irregular heartbeat disorders and diseases include and exercise-induced irregular heartbeat disorders and diseases include, but are not limited to, atrial and ventricular arrhythmia; atrial and ventricular fibrillation; atrial and ventricular tachyarrhythmia; atrial and ventricular tachycardia; catecholaminergic polymorphic ventricular tachycardia (CPVT); and exercise-induced variants thereof. Skeletal muscular disorder and diseases include, but are not limited to, skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence. Cognitive disorders and diseases include, but are not limited to, Alzheimer's Disease, forms of memory loss, and age-dependent memory loss. The compounds of the invention treat these disorders and conditions by increasing FKBP12 (calstabin1)-RyR1 binding affinity and increasing FKBP12.6 (calstabin2)-RyR2 binding affinity.

In accordance with the foregoing, the present invention provides a method for limiting or preventing a decrease in the level of RyR-bound FKBP (calstabin) in cells of a subject. As used herein, “RyR” includes RyR1, RyR2, and RyR3. Additionally, FKBP includes both FKBP12 (calstabin1) and FKBP12.6 (calstabin2). “RyR-bound FKBP” therefore refers to RyR1-bound FKBP12 (calstabin1), RyR2-bound FKBP12.6 (calstabin2), and RyR3-bound FKBP12 (calstabin1).

As used herein, “RyR” also includes an “RyR protein” and an “RyR analogue.” An “RyR analogue” is a functional variant of the RyR protein, having RyR biological activity, that has 60% or greater amino-acid-sequence homology with the RyR protein. The RyR of the present invention are unphosphorylated, phosphorylated (e.g., by PKA), or hyperphosphorylated (e.g., by PKA). As further used herein, the term “RyR biological activity” refers to the activity of a protein or peptide that demonstrates an ability to associate physically with, or bind with, FKBP12 (calstabin1) in the case of RyR1 and RyR3, and FKBP12.6 (calstabin2) in the case of RyR2 (i.e., binding of approximately two fold or, approximately five fold, above the background binding of a negative control), under the conditions of the assays described herein.

As used herein, “FKBP” includes both an “FKBP protein” and an “FKBP analogue,” whether it be FKBP12 (calstabin1) or FKBP12.6 (calstabin2). Unless otherwise indicated herein, “protein” shall include a protein, protein domain, polypeptide, or peptide, and any fragment thereof. An “FKBP analogue” is a functional variant of the FKBP protein, having FKBP biological activity, that has 60% or greater amino-acid-sequence homology with the FKBP protein, whether it be FKBP12 (calstabin1) or FKBP12.6 (calstabin2). As further used herein, the term “FKBP biological activity” refers to the activity of a protein or peptide that demonstrates an ability to associate physically with, or bind with, unphosphorylated or non-hyperphosphorylated RyR2 (i.e., binding of approximately two fold, or approximately five fold, above the background binding of a negative control), under the conditions of the assays described herein.

FKBP binds to the RyR channel, one molecule per RyR subunit. Accordingly, as used herein, the term “RyR-bound FKBP” includes a molecule of an FKBP12 (calstabin1) protein that is bound to an RyR1 protein subunit or a tetramer of FKBP12 that is in association with a tetramer of RyR1, a molecule of FKBP12.6 (calstabin2) protein that is bound to an RyR2 protein subunit or a tetramer of FKBP12.6 that is in association with a tetramer of RyR2, and a molecule of an FKBP12 (calstabin1) protein that is bound to an RyR3 protein subunit or a tetramer of FKBP12 that is in association with a tetramer of RyR3. Therefore, “RyR-bound FKBP” refers to “RyR1-bound FKBP12,” “RyR2-bound FKBP 12.6,” and “RyR3-bound FKBP12.”

In accordance with the method of the present invention, a “decrease” or “disorder” in the level of RyR-bound FKBP in cells of a subject refers to a detectable decrease, diminution or reduction in the level of RyR-bound FKBP in cells of the subject. Such a decrease is limited or prevented in cells of a subject when the decrease is in any way halted, hindered, impeded, obstructed or reduced by the administration of compounds of the invention, such that the level of RyR-bound FKBP in cells of the subject is higher than it would otherwise be in the absence of the administered compound.

The level of RyR-bound FKBP in a subject is detected by standard assays and techniques, including those readily determined from the known art (e.g., immunological techniques, hybridization analysis, immunoprecipitation, Western-blot analysis, fluorescence imaging techniques and/or radiation detection, etc.), as well as any assays and detection methods disclosed herein. For example, protein is isolated and purified from cells of a subject using standard methods known in the art, including, without limitation, extraction from the cells (e.g., with a detergent that solubilizes the protein) where necessary, followed by affinity purification on a column, chromatography (e.g., FTLC and HPLC), immunoprecipitation (with an antibody), and precipitation (e.g., with isopropanol and a reagent such as Trizol). Isolation and purification of the protein is followed by electrophoresis (e.g., on an SDS-polyacrylamide gel). A decrease in the level of RyR-bound FKBP in a subject, or the limiting or prevention thereof, is determined by comparing the amount of RyR-bound FKBP detected prior to the administration of a compound of the invention (in accordance with methods described below) with the amount detected a suitable time after administration of the compound.

A decrease in the level of RyR-bound FKBP in cells of a subject is limited or prevented, for example, by inhibiting dissociation of FKBP and RyR in cells of the subject; by increasing binding between FKBP and RyR in cells of the subject; or by stabilizing the RyR-FKBP complex in cells of a subject. As used herein, the term “inhibiting dissociation” includes blocking, decreasing, inhibiting, limiting or preventing the physical dissociation or separation of an FKBP subunit from an RyR molecule in cells of the subject, and blocking, decreasing, inhibiting, limiting or preventing the physical dissociation or separation of an RyR molecule from an FKBP subunit in cells of the subject. As further used herein, the term “increasing binding” includes enhancing, increasing, or improving the ability of phosphorylated RyR to associate physically with FKBP (e.g., binding of approximately two fold or, approximately five fold, above the background binding of a negative control) in cells of the subject and enhancing, increasing or improving the ability of FKBP to associate physically with phosphorylated RyR (e.g., binding of approximately two fold, or, approximately five fold, above the background binding of a negative control) in cells of the subject. Additionally, a decrease in the level of RyR-bound FKBP in cells of a subject is limited or prevented by directly decreasing the level of phosphorylated RyR in cells of the subject or by indirectly decreasing the level of phosphorylated RyR in the cells (e.g., by targeting an enzyme (such as PKA) or another endogenous molecule that regulates or modulates the functions or levels of phosphorylated RyR in the cells). In one embodiment, the level of phosphorylated RyR in the cells is decreased by at least 10% in the method of the present invention. In another embodiment, the level of phosphorylated RyR is decreased by at least 20%.

The subject of the present invention are in vitro and in vivo systems, including, without limitation, isolated or cultured cells or tissues, non-cell in vitro assay systems and an animal (e.g., an amphibian, a bird, a fish, a mammal, a marsupial, a human, a domestic animal (such as a cat, dog, monkey, horse, mouse or rat) or a commercial animal (such as a cow or pig)).

The cells of a subject include striated muscle cells. A striated muscle is a muscle in which the repeating units (sarcomeres) of the contractile myofibrils are arranged in registry throughout the cell, resulting in transverse or oblique striations that are observed at the level of a light microscope. Examples of striated muscle cells include, without limitation, voluntary (skeletal) muscle cells and cardiac muscle cells. In one embodiment, the cell used in the method of the present invention is a human cardiac muscle cell. As used herein, the term “cardiac muscle cell” includes cardiac muscle fibers, such as those found in the myocardium of the heart. Cardiac muscle fibers are composed of chains of contiguous heart-muscle cells, or cardiomyocytes, joined end to end at intercalated disks. These disks possess two kinds of cell junctions: expanded desmosomes extending along their transverse portions, and gap junctions, the largest of which lie along their longitudinal portions.

A decrease in the level of RyR-bound FKBP is limited or prevented in cells of a subject by administering the compounds of the invention to the subject; this would also permit contact between cells of the subject and the compounds of the invention. The compounds of the invention are modulators of calcium-ion channels. In addition to regulating Ca²⁺ levels in myocardial cells, the compounds of the invention modulate the Na⁺ current and the inward-rectifier K⁺ current in cells, such as guinea pig ventricular cells, and inhibits the delayed-rectifier K⁺ current in cells, such as guinea pig atrial cells.

Pharmaceutical Composition

The compounds of the invention are formulated into pharmaceutical compositions for administration to human subjects in a biologically compatible form suitable for administration in vivo. According to another aspect, the present invention provides a pharmaceutical composition comprising compounds of the invention in admixture with a pharmaceutically acceptable diluent and/or carrier. The pharmaceutically-acceptable carrier must be “acceptable” in the sense of being compatible with the other ingredients of the composition and not deleterious to the recipient thereof. The pharmaceutically-acceptable carrier employed herein is selected from various organic or inorganic materials that are used as materials for pharmaceutical formulations and which are incorporated as analgesic agents, buffers, binders, disintegrants, diluents, emulsifiers, excipients, extenders, glidants, solubilizers, stabilizers, suspending agents, tonicity agents, vehicles and viscosity-increasing agents. If necessary, pharmaceutical additives, such as antioxidants, aromatics, colorants, flavor-improving agents, preservatives, and sweeteners, are also added. Examples of acceptable pharmaceutical carriers include carboxymethyl cellulose, crystalline cellulose, glycerin, gum arabic, lactose, magnesium stearate, methyl cellulose, powders, saline, sodium alginate, sucrose, starch, talc and water, among others.

The pharmaceutical formulations of the present invention are prepared by methods well-known in the pharmaceutical arts. For example, the compounds of the invention are brought into association with a carrier and/or diluent, as a suspension or solution. Optionally, one or more accessory ingredients (e.g., buffers, flavoring agents, surface active agents, and the like) also are added. The choice of carrier is determined by the solubility and chemical nature of the compounds, chosen route of administration and standard pharmaceutical practice.

The compounds of the invention are administered to a subject by contacting target cells (e.g., cardiac muscle cells) in vivo in the subject with the compounds. The compounds of the invention are contacted with (e.g., introduced into) cells of the subject using known techniques utilized for the introduction and administration of proteins, nucleic acids and other drugs. Examples of methods for contacting the cells with (i.e., treating the cells with) the compounds of the invention include, without limitation, absorption, electroporation, immersion, injection, introduction, liposome delivery, transfection, transfusion, vectors and other drug-delivery vehicles and methods. When the target cells are localized to a particular portion of a subject, it is desirable to introduce the compounds for the invention directly to the cells, by injection or by some other means (e.g., by introducing the compounds into the blood or another body fluid). The target cells are contained in tissue of a subject and are detected by standard detection methods readily determined from the known art, examples of which include, without limitation, immunological techniques (e.g., immunohistochemical staining), fluorescence imaging techniques, and microscopic techniques.

Additionally, the compounds of the present invention are administered to a human or animal subject by known procedures including, without limitation, oral administration, sublingual or buccal administration, parenteral administration, transdermal administration, via inhalation or intranasally, vaginally, rectally, and intramuscularly. The compounds of the invention are administered parenterally, by epifascial, intracapsular, intracranial, intracutaneous, intrathecal, intramuscular, intraorbital, intraperitoneal, intraspinal, intrasternal, intravascular, intravenous, parenchymatous, subcutaneous or sublingual injection, or by way of catheter. In one embodiment, the agent is administered to the subject by way of delivery to the subject's muscles including, but not limited to, the subject's cardiac muscles. In an embodiment, the agent is administered to the subject by way of targeted delivery to cardiac muscle cells via a catheter inserted into the subject's heart. In other embodiments, the agent is administered via a subcutaneous pump.

For oral administration, a formulation of the compounds of the invention is presented as capsules, tablets, powders, granules or as a suspension or solution. The formulation has conventional additives, such as lactose, mannitol, corn starch or potato starch. The formulation also is presented with binders, such as crystalline cellulose, cellulose derivatives, acacia, corn starch or gelatins. Additionally, the formulation is presented with disintegrators, such as corn starch, potato starch or sodium carboxymethylcellulose. The formulation also is presented with dibasic calcium phosphate anhydrous or sodium starch glycolate. Finally, the formulation is presented with lubricants, such as talc or magnesium stearate.

For parenteral administration (i.e., administration by injection through a route other than the alimentary canal), the compounds of the invention are combined with a sterile aqueous solution that is isotonic with the blood of the subject. Such a formulation is prepared by dissolving a solid active ingredient in water containing physiologically-compatible substances, such as sodium chloride, glycine and the like, and having a buffered pH compatible with physiological conditions, so as to produce an aqueous solution, then rendering said solution sterile. The formulation is presented in unit or multi-dose containers, such as sealed ampoules or vials. The formulation is delivered by any mode of injection, including, without limitation, epifascial, intracapsular, intracranial, intracutaneous, intrathecal, intramuscular, intraorbital, intraperitoneal, intraspinal, intrasternal, intravascular, intravenous, parenchymatous, subcutaneous, or sublingual or by way of catheter into the subject's heart.

For transdermal administration, the compounds of the invention are combined with skin penetration enhancers, such as propylene glycol, polyethylene glycol, isopropanol, ethanol, oleic acid, N-methylpyrrolidone and the like, which increase the permeability of the skin to the compounds of the invention and permit the compounds to penetrate through the skin and into the bloodstream. The compounds of the invention/enhancer composition also are further combined with a polymeric substance, such as ethylcellulose, hydroxypropyl cellulose, ethylene/vinylacetate, polyvinyl pyrrolidone, and the like, to provide the composition in gel form, which are dissolved in a solvent, such as methylene chloride, evaporated to the desired viscosity and then applied to backing material to provide a patch.

In some embodiments, the composition is in unit dose form such as a tablet, capsule or single-dose vial. Suitable unit doses, i.e., therapeutically effective amounts, can be determined during clinical trials designed appropriately for each of the conditions for which administration of a chosen compound is indicated and will, of course, vary depending on the desired clinical endpoint. The present invention also provides articles of manufacture for treating and preventing disorders, such as cardiac disorders, in a subject. The articles of manufacture comprise a pharmaceutical composition of one or more of the compounds of the invention as described herein. The articles of manufacture are packaged with indications for various disorders that the pharmaceutical compositions are capable of treating and/or preventing. For example, the articles of manufacture comprise a unit dose of a compound disclosed herein that is capable of treating or preventing a muscular disorder, and an indication that the unit dose is capable of treating or preventing a certain disorder, for example an arrhythmia.

In accordance with a method of the present invention, the compounds of the invention are administered to the subject (or are contacted with cells of the subject) in an amount effective to limit or prevent a decrease in the level of RyR-bound FKBP in the subject, particularly in cells of the subject. This amount is readily determined by the skilled artisan, based upon known procedures, including analysis of titration curves established in vivo and methods and assays disclosed herein. A suitable amount of the compounds of the invention effective to limit or prevent a decrease in the level of RyR-bound FKBP in the subject ranges from about 5 mg/kg/day to about 20 mg/kg/day, and/or is an amount sufficient to achieve plasma levels ranging from about 300 ng/ml to about 1000 ng/ml. In an embodiment, the amount of compounds from the invention ranges from about 10 mg/kg/day to about 20 mg/kg/day. In another embodiment, from about 0.01 mg/kg/day to about 10 mg/kg/day is administered. In another embodiment, from about 0.01 mg/kg/day to about 5 mg/kg/day is administered. In another embodiment, from about 0.05 mg/kg/day to about 5 mg/kg/day is administered. In another, preferred embodiment, from about 0.05 mg/kg/day to about 1 mg/kg/day is administered.

Uses

The present invention provides a new range of therapeutic treatments for patients with various disorders involving modulation of the RyR receptors, particularly skeletal muscular disorders (RyR1), cardiac (RyR2) disorders, and cognitive (RyR3) disorders.

In one embodiment of the present invention, the subject has not yet developed a disorder, such as cardiac disorders (e.g., exercise-induced cardiac arrhythmia). In another embodiment of the present invention, the subject is in need of treatment for a disorder, including a cardiac disorder.

In one embodiment of the present invention, the subject has not yet developed symptoms of muscle fatigue, (e.g., exercise-induced muscle fatigue). In another embodiment of the present invention, the subject is in need of treatment for a disorder associated with muscle fatigue, including skeletal muscular disorders.

Various disorders that the compounds of the invention treat or prevent include, but are not limited to, cardiac disorders and diseases, skeletal muscular disorders and diseases, cognitive disorders and diseases, malignant hyperthermia, diabetes, and sudden infant death syndrome. Cardiac disorder and diseases include, but are not limited to, irregular heartbeat disorders and diseases; exercise-induced irregular heartbeat disorders and diseases; sudden cardiac death; exercise-induced sudden cardiac death; congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure. Irregular heartbeat disorders and diseases include and exercise-induced irregular heartbeat disorders and diseases include, but are not limited to, atrial and ventricular arrhythmia; atrial and ventricular fibrillation; atrial and ventricular tachyarrhythmia; atrial and ventricular tachycardia; catecholaminergic polymorphic ventricular tachycardia (CPVT); and exercise-induced variants thereof. Skeletal muscular disorder and diseases include, but are not limited to, skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence. Cognitive disorders and diseases include, but are not limited to, Alzheimer's Disease, forms of memory loss, and age-dependent memory loss. One skilled in the art will recognize still other diseases, including but not limited to muscular and cardiac disorders, that the compounds of the invention are useful to treat, in accordance with the information provided herein.

The amount of compounds of the invention effective to limit or prevent a decrease in the level of RyR2-bound FKBP 12.6 in the subject is an amount effective to prevent exercise-induced cardiac arrhythmia in the subject. Cardiac arrhythmia is a disturbance of the electrical activity of the heart that manifests as an abnormality in heart rate or heart rhythm. As used herein, an amount of compounds of the invention “effective to prevent exercise-induced cardiac arrhythmia” includes an amount of compounds of Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p, and II, effective to prevent the development of the clinical impairment or symptoms of the exercise-induced cardiac arrhythmia (e.g., palpitations, fainting, ventricular fibrillation, ventricular tachycardia and sudden cardiac death). The amount of the compounds effective to prevent exercise-induced cardiac arrhythmia in a subject will vary depending upon the particular factors of each case, including the type of exercise-induced cardiac arrhythmia, the subject's weight, the severity of the subject's condition, and the mode of administration of the compounds. This amount is readily determined by the skilled artisan, based upon known procedures, including clinical trials, and methods disclosed herein. In one embodiment, the amount of the compounds of the invention effective to prevent the exercise-induced cardiac arrhythmia is an amount effective to prevent exercise-induced sudden cardiac death in the subject. In another embodiment, the compounds of the invention prevent exercise-induced cardiac arrhythmia and exercise-induced sudden cardiac death in the subject.

The amount of compounds of the invention effective to limit or prevent a decrease in the level of RyR1-bound FKBP12 in the subject is an amount effective to prevent muscle fatigue in the subject. This amount is readily determined by the skilled artisan, based upon known procedures, including clinical trials, and methods disclosed herein.

Because of its ability to stabilize RyR-bound FKBP and maintain and restore balance in the context of dynamic PKA phosphorylation and dephosphorylation of RyR, the compounds of the invention are also useful in treating a subject who has already experienced clinical symptoms of these various disorders. For example, if the symptoms of the disorder are observed in the subject early enough, the compounds of the invention are effective in limiting or preventing a further decrease in the level of RyR-bound FKBP in the subject.

Additionally, the subject of the present invention is a candidate for exercise-induced cardiac disorders, such as exercise-induced cardiac arrhythmia. Exercise-induced cardiac arrhythmia is a heart condition (e.g., a ventricular fibrillation or ventricular tachycardia, including any that leads to sudden cardiac death) that develops during/after a subject has undergone physical exercise. A “candidate” for an exercise-induced cardiac disorder is a subject who is known to be, or is believed to be, or is suspected of being, at risk for developing a cardiac disorder during/after physical exercise. Examples of candidates for exercise-induced cardiac arrhythmia include, without limitation, an animal/person known to have catecholaminergic polymorphic ventricular tachycardia (CPVT); an animal/person suspected of having CPVT; and an animal/person who is known to be, or is believed to be, or is suspected of being at risk for developing cardiac arrhythmia during/after physical exercise, and who is about to exercise, is currently exercising or has just completed exercise. As discussed above, CPVT is an inherited disorder in individuals with structurally-normal hearts. It is characterized by stress-induced ventricular tachycardia—a lethal arrhythmia that causes sudden cardiac death. In subjects with CPVT, physical exertion and/or stress induce bidirectional and/or polymorphic ventricular tachycardias that lead to sudden cardiac death (SCD) in the absence of detectable structural heart disease. Individuals with CPVT have ventricular arrhythmias when subjected to exercise, but do not develop arrhythmias at rest.

Also, the subject of the present invention can be a candidate for muscle fatigue disorder, including but not limited to any chronic disorder associated with muscle fatigue, or stress or exercise-induced muscle fatigue.

Accordingly, in still another embodiment of the present invention, the subject has been exercising, or is currently exercising, and has developed an exercise-induced disorder. In this case, the amount of the compounds of the invention effective to limit or prevent a decrease in the level of RyR-bound FKBP in the subject is an amount of compound effective to treat the exercise-induced disorder in the subject. As used herein, an amount of compounds of the invention “effective to treat an exercise-induced disorder” includes an amount of compound of the invention effective to alleviate or ameliorate the clinical impairment or symptoms of the exercise-induced disorder characterized by muscle fatigue or an amount of compound of the invention effective to alleviate or ameliorate the clinical impairment or symptoms of the exercise-induced disorder (e.g., in the case of cardiac arrhythmia, palpitations, fainting, ventricular fibrillation, ventricular tachycardia, and sudden cardiac death). The amount of compounds of the invention effective to treat an exercise-induced disorder in a subject will vary depending upon the particular factors of each case, including the type of exercise-induced disorder, the subject's weight, the severity of the subject's condition, and the mode of administration of the compounds of the invention. This amount is readily determined by the skilled artisan, based upon known procedures, including clinical trials, and methods disclosed herein. In an embodiment, the compounds of the invention treat exercise-induced disorders in the subject.

The present invention further provides a method for treating exercise-induced disorders in a subject. The method comprises administering the compounds of the invention to the subject in an amount effective to treat the exercise-induced disorder in the subject. A suitable amount of the compounds of the invention effective to treat, for example, exercise-induced cardiac arrhythmia in the subject ranges from about 5 mg/kg/day to about 20 mg/kg/day, and/or is an amount sufficient to achieve plasma levels ranging from about 300 ng/ml to about 1000 ng/ml. The present invention also provides a method for preventing an exercise-induced disorder in a subject. The method comprises administering the compounds of the invention to the subject in an amount effective to prevent the exercise-induced disorder in the subject. A suitable amount of the compounds of the invention effective to prevent the exercise-induced disorder in the subject ranges from about 5 mg/kg/day to about 20 mg/kg/day, and/or is an amount sufficient to achieve plasma levels ranging from about 300 ng/ml to about 1000 ng/ml. Additionally, the present invention provides a method for preventing exercise-induced disorders in a subject. The method comprises administering the compounds of the invention to the subject in an amount effective to prevent an exercise-induced disorder in the subject. A suitable amount of the compounds of the invention effective to prevent an exercise-induced disorder in the subject ranges from about 5 mg/kg/day to about 20 mg/kg/day, and/or is an amount sufficient to achieve plasma levels ranging from about 300 ng/ml to about 1000 ng/ml.

Additionally, the compounds prevent irregular heartbeat disorders in subjects with heterozygous defects in the FKBP 12.6 gene.

The compounds of the invention can be used alone, in combination with each other, or in combination with other agents that have cardiovascular activity including, but not limited to, diuretics, anticoagulants, antiplatelet agents, antiarrhythmics, inotropic agents, chronotropic agents, α and β blockers, angiotensin inhibitors and vasodilators. Further, such combinations of the compounds of the present invention and other cardiovascular agents are administered separately or in conjunction. In addition, the administration of one element of the combination is prior to, concurrent to or subsequent to the administration of other agent(s).

In various embodiments of the above-described methods, the exercise-induced cardiac arrhythmia in the subject is associated with VT. In some embodiments, the VT is CPVT. In other embodiments of these methods, the subject is a candidate for exercise-induced cardiac arrhythmia, including candidates for exercise-induced sudden cardiac death.

In view of the foregoing methods, the present invention also provides use of the compounds of the invention in a method for limiting or preventing a decrease in the level of RyR-bound FKBP in a subject who is a candidate for a disorder. The present invention also provides use of the compounds of the invention in a method for treating or preventing a muscular disorder in a subject. Furthermore, the present invention provides use of the compounds of the invention in a method for treating or preventing exercise-induced muscular disorders in a subject.

Accordingly, the present invention further provides a method for assaying the effects of the compounds of the invention in preventing disorders and diseases associated with the RyR receptors. The method comprises the steps of: (a) obtaining or generating a culture of cells containing RyR; (b) contacting the cells with one or more of the compounds of the invention; (c) exposing the cells to one or more conditions known to increase phosphorylation of RyR in cells; and (d) determining if the one or more compounds of the invention limits or prevents a decrease in the level of RyR-bound FKBP in the cells. As used herein, a cell “containing RyR” is a cell in which RyR, including RyR1, RyR2, and RyR3, or a derivative or homologue thereof, is naturally expressed or naturally occurs. Conditions known to increase phosphorylation of RyR in cells include, without limitation, PKA.

In the method of the present invention, cells are contacted with one or more of the compounds of the invention by any of the standard methods of effecting contact between drugs/agents and cells, including any modes of introduction and administration described herein. The level of RyR-bound FKBP in the cell is measured or detected by known procedures, including any of the methods, molecular procedures and assays known to one of skill in the art or described herein. In one embodiment of the present invention, the one or more compounds of the invention limits or prevents a decrease in the level of RyR-bound FKBP in the cells.

RyR, including RyR1, RyR2, and RyR3, has been implicated in a number of biological events in cells. For example, it has been shown that RyR2 channels play an important role in EC coupling and contractility in cardiac muscle cells. Therefore, it is clear that preventive drugs designed to limit or prevent a decrease in the level of RyR-bound FKBP in cells, particularly RyR2-bound FKPB12.6 in cardiac muscle cells, are useful in the regulation of a number of RyR-associated biological events, including EC coupling and contractility. Thus, the one or more compounds of the invention are evaluated for effect on EC coupling and contractility in cells, particularly cardiac muscle cells, and therefore, usefulness for preventing exercise-induced sudden cardiac death.

Accordingly, the method of the present invention further comprises the steps of contacting one or more compounds of the invention with a culture of cells containing RyR; and determining if the one or more compounds has an effect on an RyR-associated biological event in the cells. As used herein, a “RyR-associated biological event” includes a biochemical or physiological process in which RyR levels or activity have been implicated. As disclosed herein, examples of RyR-associated biological events include, without limitation, EC coupling and contractility in cardiac muscle cells. According to this method of the present invention, the one or more compounds are contacted with one or more cells (such as cardiac muscle cells) in vitro. For example, a culture of the cells is incubated with a preparation containing the one or more compounds of the invention. The compounds' effect on a RyR-associated biological event then is assessed by any biological assays or methods known in the art, including immunoblotting, single-channel recordings and any others disclosed herein.

The present invention is further directed to one or more compounds of the invention, identified by the above-described identification method, as well as a pharmaceutical composition comprising the compound and a pharmaceutically acceptable carrier and/or diluent. The compounds are useful for preventing exercise-induced sudden cardiac death in a subject, and for treating or preventing other RyR-associated conditions. As used herein, a “RyR-associated condition” is a condition, disease, or disorder in which RyR level or activity has been implicated, and includes an RyR-associated biological event. The RyR-associated condition is treated or prevented in the subject by administering to the subject an amount of the compound effective to treat or prevent the RyR-associated condition in the subject. This amount is readily determined by one skilled in the art. In one embodiment, the present invention provides a method for preventing exercise-induced sudden cardiac death in a subject, by administering the one or more compounds of the invention to the subject in an amount effective to prevent the exercise-induced sudden cardiac death in the subject.

The present invention also provides an in vivo method for assaying the effectiveness of the compounds of the invention in preventing disorders and diseases associated with the RyR receptors. The method comprises the steps of: (a) obtaining or generating an animal containing RyR; (b) administering one or more of the compounds of the invention to the animal; (c) exposing the animal to one or more conditions known to increase phosphorylation of RyR in cells; and (d) determining the extent the compound limits or prevents a decrease in the level of RyR-bound FKBP in the animal. The method further comprises the steps of: (e) administering one or more of the compounds of the invention to an animal containing RyR; and (f) determining the extent of the effect of the compound on a RyR-associated biological event in the animal. Also provided is a pharmaceutical composition comprising this compound; and a method for preventing exercise-induced sudden cardiac death in a subject, by administering this compound to the subject in an amount effective to prevent the exercise-induced sudden cardiac death in the subject.

It has been demonstrated that compounds which block PKA activation would be expected to reduce the activation of the RyR channel, resulting in less release of calcium into the cell. Compounds that bind to the RyR channel at the FKBP binding site, but do not come off the channel when the channel is phosphorylated by PKA, would also be expected to decrease the activity of the channel in response to PKA activation or other triggers that activate the RyR channel. Such compounds would also result in less calcium release into the cell.

By way of example, the diagnostic assays screen for the release of calcium into cells via the RyR channel, using calcium-sensitive fluorescent dyes (e.g., Fluo-3, Fura-2, and the like). Cells are loaded with the fluorescent dye of choice, then stimulated with RyR activators to determine the reduction of the calcium-dependent fluorescent signal (Brillantes, et al., Stabilization of calcium release channel (ryanodine receptor) function by FK506-binding protein. Cell, 77:513-23, 1994; Gillo, et al., Calcium entry during induced differentiation in murine erythroleukemia cells. Blood, 81:783-92, 1993; Jayaraman, et al., Regulation of the inositol 1,4,5-trisphosphate receptor by tyrosine phosphorylation. Science, 272:1492-94, 1996). Calcium-dependent fluorescent signals are monitored with a photomultiplier tube, and analyzed with appropriate software. This assay can easily be automated to screen the compounds of the invention using multiwell dishes.

To demonstrate that the compounds of inhibit the PKA-dependent activation of RyR-mediated intracellular calcium release, an assay involves the expression of recombinant RyR channels in a heterologous expression system, such as Sf9, HEK293, or CHO cells. RyR could also be co-expressed with beta-adrenergic receptors. This would permit assessment of the effect of compounds of the invention on RyR activation, in response to addition of beta-adrenergic receptor agonists.

The level of PKA phosphorylation of RyR2 which correlates with the degree of heart failure also is assayed and then used to determine the efficacy of the one or more compounds of the invention to block the PKA phosphorylation of the RyR2 channel. Such an assay is based on the use of antibodies that are specific for the RyR2 protein. For example, the RyR2-channel protein is immunoprecipitated and then back-phosphorylated with PKA and [gamma³²P]-ATP. The amount of radioactive [³²P] label that is transferred to the RyR2 protein then is measured using a phosphorimager (Marx, et al., PKA phosphorylation dissociates FKBP12.6 from the calcium release channel (ryanodine receptor): defective regulation in failing hearts. Cell, 101:365-76, 2000).

Another assay of the compounds of the invention involves use of a phosphoepitope-specific antibody that detects RyR1 that is PKA phosphorylated on Ser 2843 or RyR2 that is PKA phosphorylated on Ser 2809. Immunoblotting with such an antibody can be used to assess efficacy of these compounds for therapy for heart failure and cardiac arrhythmias. Additionally, RyR2 S2809A and RyR2 S2809D knock-in mice are used to assess efficacy of therapy for heart failure and cardiac arrhythmias. Such mice further provide evidence that PKA hyperphosphorylation of RyR2 is a contributing factor in heart failure and cardiac arrhythmias by showing that the RyR2 S2809A mutation inhibits heart failure and arrhythmias, and that the RyR2 S2809D mutation worsens heart failure and arrhythmias.

Therefore, in a specific embodiment, the present invention provides a method of treating heart failure, atrial fibrillation or exercise-induced cardiac arrhythmia, comprising administering to an animal in need thereof, a therapeutically effective amount of a compound selected from the compounds of the invention.

Intracellular Ca²⁺ leak is proposed as a principal mediator of depressed muscle performance and dystrophic muscle remodeling. Muscular dystrophies are heterogeneous hereditary diseases characterized by weakness and progressive muscle wasting. Of all forms of muscular dystrophies involving the dystrophin-associated protein complex (referred to as dystrophinopathies), Duchenne muscular dystrophy (DMD) is one of the most frequent genetic diseases (X-linked; 1 in 3,500 boys) with death usually occurring before age 30 by respiratory and/or cardiac failure in high numbers of patients. Becker muscular dystrophy (BMD) represents a milder form of the disease associated with a reduction in the amount or expression of a truncated form of the dystrophin protein whereas Duchenne patients have been characterized by complete absence or very low levels of dystrophin. Duchenne and Becker's muscular dystrophy (DMD/BMD) are caused by mutations in the gene encoding the 427-kDa cytoskeletal protein dystrophin. However, with increasing age in BMD cardiac symptoms are more common than in DMD patients and do not correlate with skeletal muscle symptoms. Since genetic screening will not eliminative DMD due to a high incidence of sporadic cases, an effective therapy is highly desirable. DMD/BMD have been consistently associated with disturbed intracellular calcium metabolism. Because alterations of intracellular Ca²⁺ concentrations in DMD myofibers are believed to represent a central pathogenic mechanism, development of a therapeutic intervention that prevents intracellular Ca²⁺ abnormalities as a cause of skeletal muscle degeneration is highly desirable.

It is well established that lack of dystrophin expression is the primary genetic defect in DMD and BMD. However, the key mechanism leading to progressive muscle damage is largely unknown. It has been suggested that elevations of intracellular Ca²⁺ concentrations ([Ca²⁺]_(i)) under resting conditions directly contributed to toxic muscle cell (myofiber) damage and concurrent activation of Ca²⁺-dependent proteases. Since calpain activity is increased in necrotic muscle fibers of mdx mice and calpain dysfunction contributes to limb-girdle muscular dystrophy, preventing activation of calcium-dependent proteases by inhibiting intracellular Ca²⁺ elevations represents a strategy to prevent muscle wasting in DMD. Significant differences in [Ca²⁺]_(i) between normal and dystrophic muscles have been reported in myotubes and animal models including the dystrophin-deficient mdx mouse. Intracellular Ca²⁺ elevations are prevented by administration of a pharmaceutical composition comprising a compound of the invention.

The present invention also provides a method of diagnosis of a disease or disorder in a subject, said method comprising: obtaining a cell or tissue sample from the subject; obtaining DNA from the cell or tissue; comparing the DNA from the cell or tissue with a control DNA encoding RyR to determine whether a mutation is present in the DNA from the cell or tissue, the presence of a mutation indicating a disease or disorder. In one embodiment, the mutation is a RyR2 mutation on chromosome 1q42-q43. In another embodiment, the mutation is one or more CPTV mutations. In another embodiment, the mutation may be a mutation that is present in the DNA encoding RyR2 of a SIDS subject. The diagnostic method is used to detect the presence of a disease or disorder in an adult, a child or a fetus. The disease and disorders include, but are not limited to, cardiac disorders and diseases, skeletal muscular disorders and diseases, cognitive disorders and diseases, malignant hyperthermia, diabetes, and sudden infant death syndrome. Cardiac disorder and diseases include, but are not limited to, irregular heartbeat disorders and diseases; exercise-induced irregular heartbeat disorders and diseases; sudden cardiac death; exercise-induced sudden cardiac death; congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure. Irregular heartbeat disorders and diseases include and exercise-induced irregular heartbeat disorders and diseases include, but are not limited to, atrial and ventricular arrhythmia; atrial and ventricular fibrillation; atrial and ventricular tachyarrhythmia; atrial and ventricular tachycardia; catecholaminergic polymorphic ventricular tachycardia (CPVT); and exercise-induced variants thereof. Skeletal muscular disorder and diseases include, but are not limited to, skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence. Cognitive disorders and diseases include, but are not limited to, Alzheimer's Disease, forms of memory loss, and age-dependent memory loss.

The present invention further provides a method of diagnosis of disorders and diseases in a subject, said method comprising: obtaining cells or tissue sample from the subject; incubating the cells or tissue sample with the compound of the invention under conditions which increase phosphorylation of RyR in cells; determining (a) whether RyR bound to calstabin (i.e. RyR1 bound to calstabin1, RyR2 bound to calstabin2, or RyR3 bound to calstabin1) is increased in the cells or tissue compared to RyR bound to calstabin in control cells or tissues said control cells or tissues lacking mutant RyR calcium channels, or (b) whether a decrease in release of calcium occurs in RyR channels compared to a lack of decrease in release of calcium in the control cells; an increase in RyR-bound calstabin in (a) indicating a disorder or disease in the subject or a decrease in release of calcium in RyR channels in (b) compared to the control cells indicating a cardiac disease or disorder in the subject. The diagnostic method is used to detect the presence of a disease or disorder in an adult, a child or a fetus. The disease and disorders include, but are not limited to, cardiac disorders and diseases, skeletal muscular disorders and diseases, cognitive disorders and diseases, malignant hyperthermia, diabetes, and sudden infant death syndrome. Cardiac disorder and diseases include, but are not limited to, irregular heartbeat disorders and diseases; exercise-induced irregular heartbeat disorders and diseases; sudden cardiac death; exercise-induced sudden cardiac death; congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure. Irregular heartbeat disorders and diseases include and exercise-induced irregular heartbeat disorders and diseases include, but are not limited to, atrial and ventricular arrhythmia; atrial and ventricular fibrillation; atrial and ventricular tachyarrhythmia; atrial and ventricular tachycardia; catecholaminergic polymorphic ventricular tachycardia (CPVT); and exercise-induced variants thereof. Skeletal muscular disorder and diseases include, but are not limited to, skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence. Cognitive disorders and diseases include, but are not limited to, Alzheimer's Disease, forms of memory loss, and age-dependent memory loss.

The present invention further provides a method of diagnosis of a cardiac disorder or disease in a subject, said method comprising: obtaining cardiac cells or tissue sample from the subject; incubating the cardiac cells or tissue sample with the compound of the invention, under conditions which increase phosphorylation of RyR2 in cells; determining (a) whether RyR2 bound to calstabin2 is increased in the cells or tissue compared to RyR2 bound to calstabin2 in control cells or tissues said control cells or tissues lacking mutant RyR2 calcium channels, or (b) whether a decrease in release of calcium occurs in RyR2 channels compared to a lack of decrease in release of calcium in the control cells; an increase in RyR2-bound calstabin2 in (a) indicating a disorder or disease in the subject or a decrease in release of calcium in RyR2 channels in (b) compared to the control cells indicating a cardiac disease or disorder in the subject. The provided method is used to diagnose CPTV. The provided method also is used to diagnose sudden infant death syndrome (SIDS). The provided method additionally is used to diagnose cardiac irregular heartbeat disorders and diseases; exercise-induced irregular heartbeat disorders and diseases; sudden cardiac death; exercise-induced sudden cardiac death; congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure. Irregular heartbeat disorders and diseases include and exercise-induced irregular heartbeat disorders and diseases include, but are not limited to, atrial and ventricular arrhythmia; atrial and ventricular fibrillation; atrial and ventricular tachyarrhythmia; atrial and ventricular tachycardia; catecholaminergic polymorphic ventricular tachycardia (CPVT); and exercise-induced variants thereof.

In addition to the above-mentioned therapeutic uses, the compounds of the invention are also useful in diagnostic assays, screening assays and as research tools.

Methods of Synthesis

The present invention provides, in a further aspect, processes for the preparation of a compound of invention, and salts, solvates, hydrates, complexes, and prodrugs thereof, and pharmaceutically acceptable salts of such prodrugs. These processes are disclosed in the applications that are incorporate by reference in the first paragraph of this document, as well as in U.S. Pat. No. 7,704,409 and U.S. application Ser. No. 10/680,988 and Ser. No. 12/480,396, the content of each of which is also expressly incorporated herein by reference thereto.

It should be noted that the compounds used as starting materials for, or generated as intermediates in, the synthesis of the compounds of the invention, may themselves have structures encompassed by the formulae of the invention, and/or may themselves be active agents useful in the methods and compositions of the present invention. Such starting materials and intermediates may be useful for, inter alia, treating or preventing various disorders and diseases associated with RyR receptors such as muscular and cardiac disorders, treating or preventing a leak in a RyR2 receptor in a subject, or modulating the binding of RyR and FKBP in a subject. The present invention encompasses any of the starting materials or intermediates disclosed herein that have structures encompassed by Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p or II, and/or which are useful as active agents in the methods and compositions of the present invention. For example, in one embodiment the compound S68, which is useful as a starting material for the synthesis of compounds S69-S75, may be used for, inter alia, treating or preventing various disorders and diseases associated with RyR receptors, treating or preventing a leak in a RyR2 receptor, or modulating the binding of RyR and FKBP in a subject.

In another embodiment, the compound S26, which is useful in the synthesis of many of the compounds described herein (including S3, S4, S5, S7, S9, S11, S12, S13, S14 and other compounds) may be used for, inter alia, treating or preventing various disorders and diseases associated with RyR receptors, treating or preventing a leak in a RyR2 receptor, or modulating the binding of RyR and FKBP in a subject.

Similarly, in another embodiment, the compound S25 (see U.S. Pat. No. 7,718,644) may also be used for, inter alia, treating or preventing various disorders and diseases associated with RyR receptors, treating or preventing a leak in a RyR2 receptor, or modulating the binding of RyR and FKBP in a subject.

The compounds of the present invention are prepared in different forms, such as salts, hydrates, solvates, complexes, prodrugs or salts of prodrugs and the invention includes all variant forms of the compounds.

The present invention further provides a composition, comprising radio labeled compounds of the invention. Labeling of the compounds of the invention is accomplished using one of a variety of different radioactive labels known in the art. The radioactive label of the present invention is, for example, a radioisotope. The radioisotope is any isotope that emits detectable radiation including, without limitation, ³⁵S, ¹²⁵I, ³H, or ¹⁴C. Radioactivity emitted by the radioisotope can be detected by techniques well known in the art. For example, gamma emission from the radioisotope is detected using gamma imaging techniques, particularly scintigraphic imaging.

By way of non-limiting example, radio-labeled compounds of the invention are prepared as follows. A compound of the invention is demethylated at the phenyl ring using BBr₃. The resulting phenol compound then is re-methylated with a radio-labeled methylating agent (such as ³H-dimethyl sulfate) in the presence of a base (such as NaH) to provide ³H-labeled compounds.

Using forced swimming as an efficient protocol to increase skeletal muscle aerobic capacity in mice, the composition and phosphorylation status of the skeletal RyR1 channel complex have been investigated. Unexpectedly, after 3 weeks of 90 mins swimming twice daily, C57Bl6 wild-type mice showed significantly increased RyR1 phosphorylation by PKA while Ca²⁺-calmodulin kinase II (CaMKII) phosphorylation was not changed indicating specificity of the stress pathway RyR1 protein expression was stable, however, RyR1 channels were depleted of the stabilizing subunit calstabin1 (FKBP12). It has been shown that RyR1 hyperphosphorylation and calstabin1 depletion are consistent with leaky RyR1 channels that cause intracellular SR Ca²⁺ leak.

RyR1 channels are PKA hyperphosphorylated and depleted of the stabilizing calstabin1 subunit after 3 weeks of 90 mins swimming twice daily. The immunoprecipitated RyR1 macromolecular channel complex shows increased PKA phosphorylation at Ser-2844 (corresponding to human RyR1-Ser-2843) whereas CaMKII phosphorylation at Ser-2849 (corresponding to human RyR1-Ser-2848) is unchanged. Concomitant with increased RyR1-Ser-2844 PKA hyperphosphorylation, calstabin1 is depleted from the channel complex. Normalization of phosphorylation and calstabin1 content to four subunits of the tetrameric channel complex shows a significant in increase in PKA phosphorylation and depletion of the stabilizing calstabin1 subunit.

The compounds of the present invention are prepared in different forms, such as salts, hydrates, solvates, complexes, pro-drugs or salts of prodrugs and the invention includes all variant forms of the compounds.

The term “compound(s) of the invention” as used herein means a compound of Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p and II, and salts, hydrates, prodrugs and solvates thereof.

A “pharmaceutical composition” refers to a mixture of one or more of the compounds described herein, or pharmaceutically acceptable salts, hydrates or pro-drugs thereof, with other chemical components, such as physiologically acceptable carriers and excipients. The purpose of a pharmaceutical composition is to facilitate administration of a compound to an organism.

A “prodrug” refers to an agent which is converted into the parent drug in vivo. Pro-drugs are often useful because, in some situations, they are easier to administer than the parent drug. They are bioavailable, for instance, by oral administration whereas the parent drug is not. The prodrug also has improved solubility in pharmaceutical compositions over the parent drug. For example, the compound carries protective groups which are split off by hydrolysis in body fluids, e.g., in the bloodstream, thus releasing active compound or is oxidized or reduced in body fluids to release the compound.

A compound of the present invention also can be formulated as a pharmaceutically acceptable salt, e.g., acid addition salt, and complexes thereof. The preparation of such salts can facilitate the pharmacological use by altering the physical characteristics of the agent without preventing its physiological effect. Examples of useful alterations in physical properties include, but are not limited to, lowering the melting point to facilitate transmucosal administration and increasing the solubility to facilitate administering higher concentrations of the drug.

The compounds of the present invention form hydrates or solvates, which are included in the scope of the claims. When the compounds of the present invention exist as regioisomers, configurational isomers, conformers or diasteroisomeric forms all such forms and various mixtures thereof are included in the scope of Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p and II. It is possible to isolate individual isomers using known separation and purification methods, if desired. For example, when a compound of the present invention is a racemate, the racemate can be separated into the (S)-compound and (R)-compound by optical resolution. Individual optical isomers and mixtures thereof are included in the scope of Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, I-p and II.

The terms “animal,” “subject” and “patient” as used herein include all members of the animal kingdom including, but not limited to, mammals, animals (e.g., cats, dogs, horses, etc.) and humans.

The present invention further provides a composition, comprising radio labeled compounds of Formula I, I-a, I-b, I-c, I-d, I-e, I-f, I-g, I-h, I-i, I-j, I-k, I-k-1, I-l, I-l-1, I-m, I-m-1, I-n, I-o, and I-p. Labeling of the compounds is accomplished using one of a variety of different radioactive labels known in the art. The radioactive label of the present invention is, for example, a radioisotope. The radioisotope is any isotope that emits detectable radiation including, without limitation, ³⁵s, ¹²⁵I, ³H, or ¹⁴C. Radioactivity emitted by the radioisotope can be detected by techniques well known in the art. For example, gamma emission from the radioisotope is detected using gamma imaging techniques, particularly scintigraphic imaging.

By way of example, radio-labeled compounds of the invention are prepared as follows. A compound of the invention may be demethylated at the phenyl ring using BBr₃. The resulting phenol compound then is re-methylated with a radio-labeled methylating agent (such as ³H-dimethyl sulfate) in the presence of a base (such as NaH) to provide ³H-labeled compounds.

In accordance with the method of the present invention, the decrease in the level of RyR-bound FKBP is limited or prevented in the subject by decreasing the level of phosphorylated RyR in the subject. In one embodiment, the amount of the agent effective to limit or prevent a decrease in the level of RyR2-bound FKBP 12.6 in the subject is an amount of the agent effective to treat or prevent heart failure, atrial fibrillation and/or exercise-induced cardiac arrhythmia in the subject. In another embodiment, the amount of the agent effective to limit or prevent a decrease in the level of RyR2-bound FKBP 12.6 in the subject is an amount of the agent effective to prevent exercise-induced sudden cardiac death in the subject.

In view of the foregoing, the present invention further provides a method for treating or preventing exercise-induced cardiac arrhythmia in a subject, comprising administering to the subject a 1,4-benzothiazepine compound, as disclosed herein, in an amount effective to treat or prevent exercise-induced cardiac arrhythmia in the subject. Similarly, the present invention provides a method for preventing exercise-induced sudden cardiac death in a subject, comprising administering to the subject a 1,4-benzothiazepine compound, as disclosed herein, in an amount effective to prevent exercise-induced sudden cardiac death in the subject. Additionally, the present invention provides a method for treating or preventing atrial fibrillation or heart failure in a subject, comprising administering to the subject a compound, as disclosed herein, in an amount effective to treat or prevent the atrial fibrillation or heart failure in the subject. In each of these methods, the compound is selected from the group of compounds consisting of compounds of the formula:

wherein, n is 0, 1, or 2; R is located at one or more positions on the benzene ring; each R is independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —N₃, —SO₃H, acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, heterocyclyl, heterocyclylalkyl, alkenyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, heterocyclyl, heterocyclylalkyl, alkenyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, —SH, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl; R₁ is selected from the group consisting of H, oxo, alkyl, alkenyl, aryl, cycloalkyl, and heterocyclyl; wherein each alkyl, alkenyl, aryl, cycloalkyl, and heterocyclyl may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, —SH, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl; R₂ is selected from the group consisting of H, —C═O(R₅), —C═S(R₆), —SO₂R₇, —POR₈R₉, —(CH₂)m-R₁₀, alkyl, aryl, heteroaryl, cycloalkyl, cycloalkylalkyl, and heterocyclyl; wherein each alkyl, aryl, heteroaryl, cycloalkyl, cycloalkylalkyl, and heterocyclyl may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl; R₃ is selected from the group consisting of H, CO₂Y, CONY, acyl, alkyl, alkenyl, aryl, cycloalkyl, and heterocyclyl; wherein each acyl, alkyl, alkenyl, aryl, cycloalkyl, and heterocyclyl may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N3, —SH, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl; and wherein Y is selected from the group consisting of H, alkyl, aryl, cycloalkyl, and heterocyclyl; R₄ is selected from the group consisting of H, alkyl, alkenyl, aryl, cycloalkyl, and heterocyclyl; wherein each alkyl, alkenyl, aryl, cycloalkyl, and heterocyclyl may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, —SH, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl; R₅ is selected from the group consisting of —NR₁₆, NHNHR₁₆, NHOH, —OR₁₅, CONH₂NHR₁₆, CO₂R₁₅, CONR₁₆, CH₂X, acyl, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl; R₆ is selected from the group consisting of —OR₁₅, NHNR₁₆, NHOH, —NR₁₆, CH₂X, acyl, alkenyl, alkyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl; R₇ is selected from the group consisting of —OR₁₅, —NR₁₆, NHNHR₁₆, NHOH, CH₂X, alkyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each alkyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl; R₈ and R₉ independently are selected from the group consisting of OH, acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl; R₁₀ is selected from the group consisting of NH₂, OH, —SO₂R₁₁, —NHSO₂R₁₁, C═O(R₁₂), NHC═O(R₁₂), —OC═O(R₁₂), and —POR₁₃R₁₄; R₁₁, R₁₂, R₁₃, and R₁₄ independently are selected from the group consisting of H, OH, NH₂, NHNH₂, NHOH, acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted with one or more radicals independently selected from the group consisting of halogen, —N—, —O—, —S—, —CN, —N₃, nitro, oxo, acyl, alkenyl, alkoxyl, alkyl, alkylamino, amino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, heterocyclylalkyl, and hydroxyl; X is selected from the group consisting of halogen, CN, CO₂R₁₅, CONR₁₆, —NR₁₆, —OR₁₅, —SO₂R₇, and —POR₈R₉; and R₁₅ and R₁₆ independently are selected from the group consisting of H, acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted with one or more radicals independently selected from the group consisting of halogen, —N—, —O—, —S—, —CN, —N₃, nitro, oxo, acyl, alkenyl, alkoxyl, alkyl, alkylamino, amino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, heterocyclylalkyl, and hydroxyl, and wherein each substituted acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl radical may itself be substituted with one or more radicals independently selected from the group consisting of halogen, —N—, —O—, —S—, —CN, —N₃, nitro, oxo, acyl, alkenyl, alkoxyl, alkyl, alkylamino, amino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, heterocyclylalkyl, and hydroxy; and salts, hydrates, solvates, complexes, and prodrugs thereof.

In an embodiment of the present invention, if R₂ is C═O(R₅) or SO₂R₇, then R is at positions 2, 3, or 5 on the benzene ring.

In another embodiment of the invention, if R₂ is C═O(R₅) or SO₂R₇, then each R is independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —N₃, —SO₃H, acyl, alkyl, alkylamino, cycloalkyl, heterocyclyl, heterocyclylalkyl, alkenyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, heterocyclyl, heterocyclylalkyl, alkenyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, —SH, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl.

In another embodiment of the invention, if R₂ is C═O(R₅) or SO₂R₇, then there are at least two R groups attached to the benzene ring. Furthermore, there are at least two R groups attached to the benzene ring, and both R groups are attached at positions 2, 3, or 5 on the benzene ring. Still further, each R is independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —N₃, —SO₃H, acyl, alkyl, alkylamino, cycloalkyl, heterocyclyl, heterocyclylalkyl, alkenyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, heterocyclyl, heterocyclylalkyl, alkenyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, —SH, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl.

In another embodiment of the invention, if R₂ is C═O(R₅), then R₅ is selected from the group consisting of —NR₁₆, NHNHR₁₆, NHOH, —OR₁₅, CONH₂NHR₁₆, CONR₁₆, CH₂X, acyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted with one or more radicals independently selected from the group consisting of halogen, N, O, —S—, —CN, —N₃, nitro, oxo, acyl, alkyl, alkoxyl, alkylamino, alkenyl, aryl, (hetero-)cycloalkyl, and (hetero-)cyclyl.

Efficacy Demonstrations

As demonstrated by FIG. 1, embodiments A, B, C, and D, S36 is more potent at increasing the binding of FKBP12.6 and RyR2 than JTV-519 and does not block the L-type Ca2+ channel (I_(Ca,L)) or HERG K⁺ channel (I_(Kr)). In embodiment A, PKA phosphorylated RyR2 is generated as follows: cardiac SR membrane preparations (5 μl, 50 μg) are added to a total of 100 μl of kinase buffer (8 mM MgCl₂, 10 mM EGTA, 50 mM Tris-PIPES, pH 6.8) containing 100 μM MgATP and 40 units of PKA, and incubated at room temperature. Samples are centrifuged at 95,000 g for 10 min and the pellets are washed three times in 0.2 ml imidazole buffer. The final pellets are pooled and resuspended in imidazole buffer (final concentration≈10 μg/μl). To test for the FKBP12.6 rebinding efficiency of JTV-519, PKA phosphorylated cardiac SR (50 mg) is incubated for 30 minutes at room temperature with the test compounds and 250 nM FKBP12.6 in 10 mM imidizol buffer, pH 7.0. Samples then are centrifuged at 100,000 g for 10 minutes and pellets washed 3 times with imidizol buffer. After washing, proteins are size-fractionated on 15% PAGE. Immunoblots are developed using an anti-FKBP antibody (1:3,000 dilution). The amount of rebinding is quantified using densitometry of Western blots and is compared to the amount of FKBP associated with RyR in non-phosphorylated SR. EC₅₀'s for the compounds are determined by generating FKBP binding data using concentrations of compounds ranging from 0.5-1000 nM. In embodiment B, currents through L-type Ca²⁺ channels in isolated mouse cardiomyocytes are recorded using whole-cell patch clamp recording conditions with Ba²⁺ as the charge carrier. The extracellular solution contains (in mM): N-methyl-D-glucamine, 125; BaCl₂, 20; CsCl, 5; MgCl₂, 1; HEPES, 10; glucose, 5; pH 7.4 (HCl). The intracellular solution contains (in mM): CsCl, 60; CaCl₂, 1; EGTA, 11; MgCl₂, 1; K₂ATP, 5; HEPES, 10; aspartic acid, 50; pH 7.4 (CsOH). Under these conditions, it is expected that the measured current was carried by Ba²⁺ primarily through L-type calcium channels which is referred to as I_(Ca,L). Drugs are applied by a local solution changer and reach the cell membrane within 1 s. The effects of nifedipine and S36 are tested with 20 ms long voltage-clamp steps to +10 or +20 mV (peak of current-voltage relation for each individual cell) from holding potentials of −80 mV or −40 mV. In embodiment C, the voltage-dependence of L-type Ca²⁺ current blocked by JTV-519 (1 μM) and S36 (l μM) are measured and presented.

As demonstrated by FIG. 2, embodiments A, B, C, and D, S36 prevents exercise-induced sudden cardiac death at lower plasma levels compared with JTV-519. In embodiment A are shown representative ECGs of an untreated FKBP12.6^(−/−) mouse and JTV-519-treated FKBP12.6^(−/−) and FKBP12.6^(−/−) mice. Mice are treated with 0.5 mg JTV-519/per kilogram of body weight per hour for 7 days with an implanted osmotic mini-pump. JTV-519 has no effect on resting heart rate or other ECG parameters such as heart rate (HR). In embodiment B are shown sustained polymorphic ventricular tachycardia recorded by telemetry in an untreated FKBP12.6^(−/−) mouse (upper tracing) subjected to exercise testing, immediately followed by injection with 0.5 mg epinephrine per kilogram of body weight. Representative telemetry ECG recording of a JTV-519-treated FKBP12.6^(−/−) mouse following the same protocol is shown in the bottom tracing. In embodiment C are shown numbers of mice with cardiac death (left), sustained VTs (>10 beats, middle), and nonsustained VTs (3 to 10 arrhythmogenic beats, right) in experimental groups of mice subjected to exercise testing and injection with 0.5 mg/kg epinephrine. In embodiment D, the dose-dependence of pharmacological effects of JTV-519 and S36 is shown. Plasma levels of 1 μM JTV-519 prevent cardiac arrhythmias and sudden cardiac death in FKBP12.6^(−/− mice. Plasma levels of) 1 μM and 0.02 μM S36 also prevent cardiac arrhythmias and sudden cardiac death in FKBP12.6^(−/−) mice.

FIG. 3 shows the results of treated mice that are subjected to permanent ligation of the left anterior descending coronary artery resulting in myocardial infarction.

As demonstrated by FIG. 4, S36 improves cardiac function in chronic heart failure post-myocardial infarction. Wild-type mice are subjected to permanent ligation of the left anterior descending coronary artery resulting in myocardial infarction. Seven days following myocardial infartion, mice are treated with S36 (plasma concentration 200 nM) or placebo. Heart weight to body weight (HW/BW) ratios and pressure-volume loops quantifications (dP/dt, slope of the maximum derivative of change in systolic pressure over time) show reverse remodeling and improved cardiac contractility in S36-treated mice compared with placebo.

FIG. 5 is a summary graph of EC50 values of JTV-519 and compounds S1-S67 disclosed herein. The FKBP12.6 rebinding assay described above is used to determine the amount of FKBP12.6 binding to PKA-phosphorylated RyR2 at various concentrations (0.5-1000 nM) of the compounds shown. EC₅₀ values are calculated using Michaelis-Menten curve fitting.

FIG. 6, embodiments A, B, and C, show CPVT-associated RyR2-P2328S channel function and structure. In embodiment A are shown representative single-channel current traces of RyR2-P2328S and RyR2-WT while embodiment B shows RyR2-P2328S. Embodiment C shows immunoblot analysis of calstabin-2 binding of RyR2-P2328S.

As demonstrated by FIG. 7, embodiments A and B, treatment with JTV-519 reduces PKA phosphorylation of RyR2 in mice with heart failure. Equivalent amounts of RyR2 are immunoprecipitated with an antibody against RyR2 (top blot). Representative immunoblots (embodiment A) and bar graphs (embodiment B) show the amount of PKA phosphorylated RyR2 at Ser-2808 bound to RyR2 in wild-type and calstabin2(FKBP12.6)^(−/−) mice. Treatment with JTV-519 (0.5 mg/kg/h) for 28 days post-myocardial infarction reduces PKA-phosphorylation of RyR2, presumably due to reverse cardiac remodeling, in wildtype but not calstabin-2 (FKBP12.6)^(−/−) mice.

As demonstrated by FIG. 8, embodiments A and B, mice in which cardiac RyR2 cannot be PKA phosphorylated (RyR2-S2808A knockin mice) have improved cardiac function following myocardial infarction. Shown in embodiment A is the quantification of M-mode echocardiograms showing improved ejection fraction in RyR2-S2808A knockin mice compared with wildtype 28 days following permanent coronary artery ligation. Shown in embodiments B and C are pressure-volume loop quantifications showing (embodiment B) improved cardiac contractility and decreased cardiac dilation (embodiment C) in RyR2-S2808A knockin mice compared with wildtype following myocardial infarction.

FIG. 9, embodiments A and B, demonstrate that mdx skeletal muscle has normal levels of RyR1 PKA phosphorylation, but depleted levels of calstabin1. The immunoblots in embodiment A show that mdx type mice have depleted levels of calstabin1 compared to a control (wild-type) mouse. The summary bar graphs of embodiment B show that the mdx mouse, nevertheless, has an equivalent level of PKA-phosphorylation. Therefore, it is concluded that calstabin1 depletion is a defect that is consistent with the intracellular Ca²⁺ leak observed in skeletal muscle cells from mdx mice and myofibers from human mutation carriers. Intracellular SR Ca²⁺ leak is likely to contribute to myofiber death and wasting of muscle mass by toxic intracellular Ca²⁺ overload and activation of proteases.

FIG. 10, embodiments A, B, and C, demonstrates that SR Ca²⁺ leak at the subcellular level in skeletal muscles of animals with heart failure is detectable. Life quality and prognosis in heart failure (HF) patients is severely decreased due to skeletal muscle dysfunction (e.g., shortness of breath due to diaphragmatic weakness, and exercise intolerance due to limb skeletal muscle fatigue) in addition to depressed cardiac function. Dysregulation of intracellular SR Ca²⁺ release is a pathogenic mechanism underlying skeletal muscle dysfunction in HF. HF in animals causes significantly accelerates intrinsic skeletal muscle fatigue.

Embodiments A and B of FIG. 10 are AF/F fluorescence line scan images of representative examples of Ca²⁺ sparks in myofibers from sham and postmyocardial infarction (PMI) rats and corresponding Ca²⁺ spark time course. Embodiment C shows the relative distribution of the spatio-temporal properties of the Ca²⁺ sparks. Charts indicate 25, 50, 75 percentiles, the horizontal lines indicate the range from 1-99% of the distribution. Sham, open symbols (n=137, three animals); postmyocardial infarction (PMI), gray symbols (n=82, two animals). *, P<0.05. FDHM, full duration at 50% peak amplitude; FWHM, full width at 50% peak amplitude.

FIG. 11, embodiment A, B, C, and D demonstrates that Ser-2843 is the unique PKA phosphorylation site in skeletal RyR1 channels. (A) Representative single channel traces of wild-type RyR1, (B) effect of exogenous PKA phosphorylation of RyR1 (wt RyR1-P), (C) PKA does not affect RyR1-52843A that contains a non-functional PKA phosphorylation site. Since PKA does not increase RyR1-52843A activity, Ser-2843 appears to constitute the unique PKA phosphorylation site in RyR1 channels in skeletal muscle. Accordingly, (D) constitutively phosphorylated RyR1-52843D mimics exogenous PKA phosphorylation shown in (B) confirming that Ser-2843 is the unique PKA phosphorylation site in skeletal RyR1 channels. RyR1 single channel recordings in planar lipid bilayers show activity of the channels at 150 nM [Ca²⁺]_(cis) (cytosolic side) with 1 mM ATP. Recordings were at 0 mV, closed state of the channels as indicated by ‘c’, and channel openings are upward deflections. All point amplitude histograms are shown on the right. Open probability (P_(o)) and mean closed (Tc) and open (To) dwell times are indicated above each channel tracing.

FIG. 12, embodiments A and B, demonstrates the depletion of stabilizing calstabin1 and PKA hyperphosphorylation of RyR1 channels from sustained exercise. Aerobic exercise can be defined as a form of physical exercise that increases the heart rate and enhances oxygen intake to improve performance. Examples of aerobic exercise are running, cycling, and swimming. During the study of FIG. 12, mice were challenged by aerobic exercise (forced swimming) for 90 mins twice daily. The animals were accustomed to swimming in preliminary training sessions: day −3 twice 30 mins, day −2 twice 45 mins, day −1 twice 60 mins, day 0 and following twice 90 mins. Mice were then exercised for 1, 7, or 21 additional, consecutive days for 90 mins twice daily. Between swimming sessions separated by a 4 hour rest period the mice are kept warm and given food and water. An adjustable-current water pool was used to exercise mice by swimming. An acrylic pool (90 cm long×45 cm wide×45 cm deep) filled with water to a depth of 25 cm was used. A current in the pool was generated with a pump. The current speed during the swimming session was at a constant speed of 1 l/min flow rate. The water temperature was maintained at 34° C. with an electric heater. Age- and weight-matched mice were used to exclude differences in buoyancy from body fat.

Using forced swimming as an efficient protocol to increase skeletal muscle aerobic capacity in mice, the composition and phosphorylation status of the skeletal RyR1 channel complex have been investigated. Unexpectedly, after 3 weeks of 90 mins swimming twice daily, C57Bl6 wild-type mice showed significantly increased RyR1 phosphorylation by PKA while Ca²⁺-calmodulin kinase II (CaMKII) phosphorylation was not changed indicating specificity of the stress pathway RyR1 protein expression was stable, however, RyR1 channels were depleted of the stabilizing subunit calstabin1 (FKBP12). It has been shown that RyR1 hyperphosphorylation and calstabin1 depletion are consistent with leaky RyR1 channels that cause intracellular SR Ca²⁺ leak.

RyR1 channels are PKA hyperphosphorylated and depleted of the stabilizing calstabin1 subunit after 3 weeks of 90 mins swimming twice daily. As seen in Embodiment A, the immunoprecipitated RyR1 macromolecular channel complex shows increased PKA phosphorylation at Ser-2844 (corresponding to human RyR1-Ser-2843) whereas CaMKII phosphorylation at Ser-2849 (corresponding to human RyR1-Ser-2848) is unchanged. Concomitant with increased RyR1-Ser-2844 PKA hyperphosphorylation, calstabin1 is depleted from the channel complex. As seen in embodiment B, normalization of phosphorylation and calstabin1 content to four subunits of the tetrameric channel complex shows a significant in increase in PKA phosphorylation and depletion of the stabilizing calstabin1 subunit. Control, non-exercised mice; swim, mice exercised 90 mins twice daily for 3 weeks (preliminary data). P<0.05.

FIG. 13, embodiments A and B, demonstrate that PKA phosphorylation increases for increasing durations of sustained exercise. To investigate the influence of the duration of sustained exercise on the RyR1 Ca²⁺ release channel defect, mice were exposed to swimming for 1, 7, or 21 days followed by immediate sacrifice. Longer exposure to sustained exercise results in a significant increase of RyR1 PKA hyperphosphorylation beginning at 7 days and saturating at 21 days.

In FIG. 13, embodiment A, the immunoprecipitated RyR1 channel complex shows significantly and above physiologic levels increased PKA phosphorylation at Ser-2844 (corresponding to human RyR1-Ser-2843) after 7 days of swimming exercise. In FIG. 13, embodiment B, inormalization of RyR2-Ser-2844 phosphorylation within the tetrameric channel complex documents a significant increase in PKA phosphorylation. *, P<0.05; **, P<0.005.

In summary, the data of FIG. 13 shows that sustained exercise results in significantly increased RyR1 phosphorylation by protein kinase A (PKA) which contributes to depletion of the stabilizing calstabin1 subunit from the channel complex as the cause of a gain-of-function defect.

FIG. 14 provides data showing that showing that chronically increased sympathetic stimulation of skeletal muscles, results in RyR1-dependent intracellular Ca²⁺ leak and significantly increased muscle fatigue. As shown in FIG. 14 for mice and rats with heart failure from myocardial infarction, chronic RyR1 PKA hyperphosphorylation results in increased muscle fatigue.

In embodiment A, it can be seen that heart failure skeletal muscle fatigues earlier than control. Rat soleus muscle (n=5 control, n=8 HF) was mounted in a tissue bath to assess contractile function. Representative fatigue time tracing is shown for control and HF skeletal muscles. Bar graph shows mean (±S.D.) time to 40% fatigue. *, P<0.05. In embodiment B, it can be seen that heart failure skeletal muscle achieved maximal tetanic force more slowly than control skeletal muscles. Tetanic force was induced by high-frequency field stimulation. Bar graph shows tetanic 50% contraction time. **, P<0.01. Embodiment C demonstrates the correlation between time to fatigue and RyR1 PKA phosphorylation (r=0.88) in rat skeletal muscle from sham and heart failure animals. Muscle function and RyR1 PKA phosphorylation were assessed using contralateral soleus muscles from each animal.

In summary, FIG. 14 provides data showing that sustained exercise causes RyR1 PKA hyperphosphorylation and calstabin1 depletion, and FIG. 14 shows that the identical defect occurs in disease forms with increased sympathetic activity causing intracellular SR Ca²⁺ leak and significantly accelerated skeletal muscle fatigue.

An additional problem during sustained exercise and stress is skeletal muscle degeneration further contributing to decreased skeletal muscle performance. To assess structural changes during sustained exercise, histologic changes in the fast-twitch muscles of mice exposed to 3 weeks of exercise by swimming have been characterized. Results are shown in FIG. 15. Cross-sections of the mouse M. extensor digitorum longus (EDL) showed histologic changes consistent with myofiber degeneration from intracellular Ca²⁺ overload from defective RyR1 channels. Therefore sustained exercise for 90 mins twice daily triggers a dystrophic phenotype in EDL muscles of normal C57Bl6 mice.

Trichrome stain shows packed myofibers of similar cross-sectional dimension in non-exercised control (WT) mice (left). Three weeks swimming results in myofiber degeneration and interstitial collagen deposits with irregular fiber sizes. Hematoxylin-eosin (H&E) stain indicates nuclear changes and myofiber death. These changes are consistent with dystrophic remodeling.

The rapid delayed rectifier potassium channel (I(Kr)) is important for repolarization of the cardiac action potential. HERG is the pore-forming subunit of the I(Kr) channel. Suppression of I(Kr) function, for example as a side-effect of a drug or the result of a mutation in hERG, can lead to long-QT (LQT) syndrome, which is associated with increased risk of life-threatening arrhythmias. The compounds of the present invention exhibit a lower level of hERG blocking activity than JTV-519, as demonstrated in FIGS. 16-35. Thus, the compounds of the present invention are expected to be less toxic and/or exhibit fewer side effects than JTV-519.

FIGS. 16 to 19 illustrate the effect of the compound ARM036 (also referred to as S36) and ARM036-Na (a sodium salt of ARM036) on hERG currents.

FIG. 16 shows a typical hERG voltage-clamp current recording before (control) and after application of ARM036 at 100 μM. The voltage pulse protocol used to activate the hERG currents is illustrated below the current trace. It can be seen that, following activation by the conditioning prepulse (to +20 mV), partial repolarization (−50 mV test pulse) of the membrane evoked a large, slowly decaying outward tail current. Application of ARM036 minimally reduced the outward tail current in a concentration- and time-dependent manner.

FIG. 17 shows a typical time course of the effect of ARM036 at 100 mM on the amplitude of the hERG channel current.

FIG. 18 is a graph showing the concentration-dependence of the effect of ARM036 on the hERG current. Table 1 provides the numerical data that is illustrated graphically in FIG. 18. Because the highest concentration of ARM036 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM036.

TABLE 1 Concentration (μM) Mean SD SEM N 10 0.7% 0.3% 0.2% 3 100 0.9% 0.7% 0.4% 3

FIG. 19 is a graph showing the concentration-dependence of the effect of ARM036-Na on the hERG current. Table 2 provides the numerical data that is illustrated graphically in FIG. 18. Because the highest concentration of ARM036-Na tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM036-NA.

TABLE 2 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM036-Na ND 0.01 0.2% 0.2% 0.2% 2 0.0% 0.3% 0.1 5.0% 7.1% 5.0% 2 10.0% 0.0% 1 5.5% 4.4% 3.1% 2 2.4% 8.6% 10 6.7% 2.2% 1.6% 2 5.1% 8.2%

FIG. 20 is a graph showing the concentration-dependence of the effect of ARM047 on the hERG current. Table 3 provides the numerical data that is illustrated graphically in FIG. 20. The IC₅₀ value for ARM047 block of the hERG current was 2.496 μM.

TABLE 3 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM047 2.495 0.01 2.7% 1.4% 1.0% 2 1.7% 3.7% 0.1 9.7% 4.5% 3.2% 2 6.5% 12.9% 1 29.6% 8.6% 5.0% 3 30.8% 20.4% 37.5% 10 78.0% 3.6% 2.1% 3 82.1% 75.9% 75.9%

FIG. 21 is a graph showing the concentration-dependence of the effect of ARM048 on the hERG current. Table 4 provides the numerical data that is illustrated graphically in FIG. 21. Because the highest concentration of ARM048 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM048.

TABLE 4 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM048 ND 0.01 1.3% 1.1% 0.8% 2 0.5% 2.0% 0.1 3.6% 0.9% 0.8% 2 4.2% 2.9% 1 4.1% 0.8% 0.6% 2 4.7% 3.5% 10 14.0% 1.7% 1.2% 2 15.2% 12.8%

FIG. 22 is a graph showing the concentration-dependence of the effect of ARM050 on the hERG current. Table 5 provides the numerical data that is illustrated graphically in FIG. 22. Because the highest concentration of ARM050 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM050.

TABLE 5 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM050 ND 0.01 1.8% 0.9% 0.7% 2 1.1% 2.4% 0.1 3.7% 1.4% 1.0% 2 2.7% 4.7% 1 6.1% 1.4% 1.0% 2 7.1% 5.1% 10 24.2% 4.0% 2.9% 2 27.0% 21.3%

FIG. 23 is a graph showing the concentration-dependence of the effect of ARM057 on the hERG current. Table 6 provides the numerical data that is illustrated graphically in FIG. 23. Because the highest concentration of ARM057 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM057.

TABLE 6 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM057* ND 0.01 0.2% 0.2% 0.2% 2 0.3% 0.0% 0.1 7.3% 4.5% 3.2% 2 4.1% 10.4% 1 2.7% 3.7% 2.6% 2 5.3% 0.1% 10 13.6% 6.7% 4.8% 2 18.3% 8.8%

FIG. 24 is a graph showing the concentration-dependence of the effect of ARM064 on the hERG current. Table 7 provides the numerical data that is illustrated graphically in FIG. 24. Because the highest concentration of ARM064 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM064.

TABLE 7 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM064 ND 0.01 0.2% 1.1% 0.8% 2 −0.6% 1.0% 0.1 9.0% 1.3% 0.9% 2 9.9% 8.1% 1 9.6% 5.1% 3.6% 2 13.2% 6.0% 10 30.3% 2.5% 1.7% 2 32.0% 28.5%

FIG. 25 is a graph showing the concentration-dependence of the effect of ARM074 on the hERG current. Table 8 provides the numerical data that is illustrated graphically in FIG. 25. Because the highest concentration of ARM050 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM074.

TABLE 8 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM074 ND 0.01 1.9% 1.6% 1.1% 2 0.6% 3.0% 0.1 4.8% 1.6% 1.1% 2 5.9% 3.7% 1 1.3% 1.6% 1.1% 2 0.2% 2.4% 5.6% 10 9.5% 0.2% 0.2% 2 9.3% 9.6% 14.0%

FIG. 26 is a graph showing the concentration-dependence of the effect of ARM075 on the hERG current. Table 9 provides the numerical data that is illustrated graphically in FIG. 26. Because the highest concentration of ARM075 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM075.

TABLE 9 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM075 ND 0.01 1.4% 0.4% 0.3% 2 1.7% 1.1% 0.1 3.7% 1.6% 1.1% 2 2.6% 4.8% 1 3.9% 0.3% 0.2% 2 3.7% 4.1% 10 16.0% 1.8% 1.3% 2 14.7% 17.2%

FIG. 27 is a graph showing the concentration-dependence of the effect of ARM076 on the hERG current. Table 10 provides the numerical data that is illustrated graphically in FIG. 27. Because the highest concentration of ARM076 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM076.

TABLE 10 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM076 ND 0.01 0.4% 0.5% 0.4% 2 0.0% 0.7% 0.1 2.5% 2.2% 1.6% 2 4.0% 0.9% 1 3.1% 1.5% 1.1% 2 2.0% 4.1% 10 11.2% 1.6% 1.2% 2 10.0% 12.3%

FIG. 28 is a graph showing the concentration-dependence of the effect of ARM077 on the hERG current. Table 11 provides the numerical data that is illustrated graphically in FIG. 28. Because the highest concentration of ARM077 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM077.

TABLE 11 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM077 ND 0.01 1.3% 0.2% 0.2% 2 1.4% 1.1% 0.1 7.5% 5.5% 3.9% 2 11.4% 3.6% 1 3.6% 0.6% 0.4% 2 3.1% 4.0% 10 4.1% 4.5% 3.2% 2 0.9% 7.2%

FIG. 29 is a graph showing the concentration-dependence of the effect of ARM101 on the hERG current. Table 12 provides the numerical data that is illustrated graphically in FIG. 29. Because the highest concentration of ARM101 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM101.

TABLE 12 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM101 4.406 0.01 3.4% 1.3% 0.9% 2 4.3% 2.5% 0.1 6.4% 1.8% 1.3% 2 5.1% 7.6% 1 23.0% 5.7% 4.1% 2 18.9% 27.0% 10 65.8% 1.3% 0.9% 2 66.7% 64.9%

FIG. 30 is a graph showing the concentration-dependence of the effect of ARM102 on the hERG current. Table 13 provides the numerical data that is illustrated graphically in FIG. 30. Because the highest concentration of ARM102 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM102.

TABLE 13 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM102* ND 0.01 2.5% 2.8% 2.0% 2 0.5% 4.4% 0.1 4.2% 3.3% 2.4% 2 1.8% 6.5% 1 5.7% 6.9% 4.9% 2 0.8% 10.5% 10 47.3% 1.5% 1.1% 2 46.2% 48.3%

FIG. 31 is a graph showing the concentration-dependence of the effect of ARM103 on the hERG current. Table 14 provides the numerical data that is illustrated graphically in FIG. 31. Because the highest concentration of ARM103 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM103.

TABLE 14 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM103* ND 0.1 6.8% 7.5% 5.3% 2 12.1% 1.5% 0.1 3.3% 1.3% 0.9% 2 4.2% 2.4% 1 7.3% 3.3% 2.3% 2 5.0% 9.6% 10 29.2% 1.1% 0.8% 2 28.4% 29.9%

FIG. 32 is a graph showing the concentration-dependence of the effect of ARM104 on the hERG current. Table 15 provides the numerical data that is illustrated graphically in FIG. 32. Because the highest concentration of ARM104 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM104.

TABLE 15 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM104 ND 0.01 1.6% 0.5% 0.4% 2 1.2% 1.9% 0.1 2.5% 2.0% 1.4% 2 1.1% 3.9% 1 4.6% 2.1% 1.5% 2 3.1% 6.0% 10 7.4% 1.3% 0.9% 2 8.3% 6.5%

FIG. 33 is a graph showing the concentration-dependence of the effect of ARM106 on the hERG current. Table 16 provides the numerical data that is illustrated graphically in FIG. 33. Because the highest concentration of ARM106 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM106.

TABLE 16 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM106 ND 0.01 1.3% 0.6% 0.4% 2 0.9% 1.7% 0.1 7.2% 3.5% 2.5% 2 9.6% 4.7% 1 6.1% 3.7% 2.7% 2 8.7% 3.4% 10 15.9% 4.0% 2.8% 2 18.7% 13.1%

FIG. 34 is a graph showing the concentration-dependence of the effect of ARM107 on the hERG current. Table 17 provides the numerical data that is illustrated graphically in FIG. 34. Because the highest concentration of ARM107 tested resulted in less than 50% current inhibition, it was not possible to determine an IC₅₀ value for ARM107.

TABLE 17 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM107 ND 0.01 2.9% 1.6% 1.2% 2 1.7% 4.0% 0.1 4.0% 1.2% 0.9% 2 3.1% 4.8% 1 6.2% 5.9% 4.2% 2 2.0% 10.4% 10 32.1% 11.1% 7.9% 2 24.2% 39.9%

FIG. 35A is a graph showing the concentration-dependence of the effect of S26 on the hERG current. Table 18 provides the numerical data that is illustrated graphically in FIG. 35A. The IC₅₀ value for S26 was 7.029 μM.

TABLE 18 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) S26 7.029 0.01 8.9% 0.3% 0.2% 2 9.1% 8.7% 0.1 10.5% 2.6% 1.9% 2 12.3% 8.6% 1 12.3% 1.3% 1.0% 2 11.3% 13.2% 10 58.3% 2.6% 1.8% 2 56.4% 60.1%

FIG. 35B is a graph showing the concentration-dependence of the effect of JTV-519 (referred to in the figure as “ARM00X”) on the hERG current. Table 19 provides the numerical data that is illustrated graphically in FIG. 35B. The IC₅₀ value for JTV-519 was 0.463 μM.

TABLE 19 Mean % % % IC₅₀ Conc. hERG Standard Standard Individual Data Test Article ID (μM) (μM) Inhibition Deviation Error n (% Inhibition) ARM0XX 0.463 0.01 5.0% 0.3% 0.2% 2 5.2% 4.8% 0.1 18.1% 11.4% 8.1% 2 10.0% 26.1% 1 68.4% 19.1% 13.5% 2 81.9% 54.9% 10 92.8% 5.8% 4.1% 2 96.9% 88.7%

The antiarrhythmic drug E-4031, a known blocker of hERG currents, was used as a positive control. E-4031 blocked the hERG current with an IC₅₀ of 0.5 μM (n=6).

In summary, the compounds of the present invention exhibit reduced hERG blocking activity as compared to JTV-519. Thus, the compounds of the invention are expected to be less toxic and/or exhibit fewer side effects than JTV-519.

Table 20 below provides EC₅₀ values for compounds S1-S107. These EC₅₀ data were obtained using thee FKBP 12.6 rebinding assay described above to determine the amount of FKBP12.6 binding to PKA-phosphorylated RyR2 at various concentrations (0.5-1000 nM) of the compounds shown in Table 20. The EC₅₀ values are calculated using Michaelis-Menten curve fitting.

TABLE 20 Compound No. EC50 (nM) 1 150 2 211 3 4 102 5 208 6 252 7 55 9 205 11 181 12 197 13 174 14 182 19 265 20 22 355 23 268 25 40 26 40 27 ca. 50 36 15 37 38 44 40 100 43 80 44 121 45 80 46 150 47 20 48 100 49 81 50 40 51 175 52 143 53 200 54 77 55 111 56 95 57 73 58 55 59 102 60 68 61 95 62 45 63 52 64 44 66 110 67 89 68 ca. 100 74 220 75 150 76 25 77 60 101 105 102 135 104 111 107 190

High-Throughput Screening Method

In addition to the compounds disclosed herein, other compounds can be discovered that are capable of modulating calcium ion channel activity, in particular those channels related to the RyR series of calcium ion channels. Provided herein is a highly-efficient assay for high-throughput screening of other compounds that are capable of modulating calcium ion channel activity.

By way of example, and as shown in Example 5 below, a highly-efficient assay for high-throughput screening for small molecules is developed by immobilizing FKBP, either FKBP12 or FKBP12.6 (e.g., wild-type FKBP12.6 or a fusion protein, such as GST-FKBP12.6) onto a 96-well plate coated with glutathione, using standard procedures. PKA-phosphorylated ryanodine receptor (RyR), specifically RyR1 or RyR3 in the case of FKBP12 and RyR2 in the case of FKBP12.6, is loaded onto the FKBP-coated plate, and incubated with compounds at various concentrations (10-100 nM) for 30 min. Thereafter, the plate is washed to remove the unbound RyR, and then incubated with anti-RyR antibody (e.g., for 30 min). The plate is washed again to remove unbound anti-RyR antibody, and then treated with florescent-labeled secondary antibody. The plate is read by an automatic fluorescent plate reader for binding activity.

Alternatively, RyR is PKA-phosphorylated in the presence of ³²P-ATP. Radioactive PKA-phosphorylated RyR is loaded onto an FKBP-coated, 96-well plate, in the presence of JTV-519 analogues and other compounds at various concentrations (10-100 nM) for 30 min. The plate is washed to remove the unbound radiolabeled RyR, and then read by an automatic plate reader. PKA-phosphorylated RyR also is coated to the plate, and incubated with ³²S-labeled FKBP in the presence of the compounds.

The present invention is described in the following Examples, which are set forth to aid in the understanding of the invention and should not be construed to limit in any way the scope of the invention as defined in the claims which follow thereafter.

EXAMPLES Example 1 RyR2 PKA Phosphorylation and FKBP12.6 Binding

Cardiac SR membranes are prepared, as previously described (Marx, et al., PKA phosphorylation dissociates FKBP12.6 from the calcium release channel (ryanodine receptor): defective regulation in failing hearts. Cell, 101:365-76, 2000; Kaftan, et al., Effects of rapamycin on ryanodine receptor/Ca⁽²⁺⁾-release channels from cardiac muscle. Circ. Res., 78:990-97, 1996). ³⁵S-labelled FKBP12.6 was generated using the TNT™ Quick Coupled Transcription/Translation system from Promega (Madison, Wis.). [³H] ryanodine binding is used to quantify RyR2 levels. 100 μg of microsomes are diluted in 100 μl of 10-mM imidazole buffer (pH 6.8), incubated with 250-nM (final concentration) [³⁵S]-FKBP12.6 at 37° C. for 60 min, then quenched with 500 μl of ice-cold imidazole buffer. Samples are centrifuged at 100,000 g for 10 min and washed three times in imidazole buffer. The amount of bound [³⁵S]-FKBP12.6 is determined by liquid scintillation counting of the pellet.

Example 2 Immunoblots

Immunoblotting of microsomes (50 μg) is performed as described, with anti-FKBP12/12.6 (1:1,000), anti-RyR-5029 (1:3,000) (Jayaraman, et al., FK506 binding protein associated with the calcium release channel (ryanodine receptor). J. Biol. Chem., 267:9474-77, 1992), or anti-phosphoRyR2-P2809 (1:5,000) for 1 h at room temperature (Reiken, et al., Beta-blockers restore calcium release channel function and improve cardiac muscle performance in human heart failure. Circulation, 107:2459-66, 2003). The P2809-phosphoepitope-specific anti-RyR2 antibody is an affinity-purified polyclonal rabbit antibody, custom-made by Zymed Laboratories (San Francisco, Calif.) using the peptide, CRTRRI-(pS)-QTSQ, which corresponds to RyR2 PKA-phosphorylated at Ser²⁸⁰⁹. After incubation with HRP-labeled anti-rabbit IgG (1:5,000 dilution; Transduction Laboratories, Lexington, Ky.), the blots are developed using ECL (Amersham Pharmacia, Piscataway, N.J.).

Example 3 Single-Channel Recordings

Single-channel recordings of native RyR2 from mouse hearts, or recombinant RyR2, are acquired under voltage-clamp conditions at 0 mV, as previously described (Marx, et al., PKA phosphorylation dissociates FKBP12.6 from the calcium release channel (ryanodine receptor): defective regulation in failing hearts. Cell, 101:365-76, 2000). Symmetric solutions used for channel recordings are: trans compartment—HEPES, 250 mmol/L; Ba(OH)₂, 53 mmol/L (in some experiments, Ba(OH)₂ is replaced by Ca(OH)₂); pH 7.35; and cis compartment—HEPES, 250 mmol/L; Tris-base, 125 mmol/L; EGTA, 1.0 mmol/L; and CaCl₂, 0.5 mmol/L; pH 7.35. Unless otherwise indicated, single-channels recordings are made in the presence of 150-nM [Ca²⁺] and 1.0-mM [Mg²⁺] in the cis compartment. Ryanodine (5 mM) is applied to the cis compartment to confirm identity of all channels. Data is analyzed from digitized current recordings using Fetchan software (Axon Instruments, Union City, Calif.). All data is expressed as mean±SE. The unpaired Student's t-testis used for statistical comparison of mean values between experiments. A value of p<0.05 is considered statistically significant.

Example 4 High-Throughput Screening Method

Assays for screening biologically-active small molecules have been developed. These assays are based on rebinding of FKBP12 protein to RyR.

A highly-efficient assay for high-throughput screening for small molecules is developed by immobilization of FKBP12.6 (GST-fusion protein) onto a 96-well plate coated with glutathione. PKA-phosphorylated ryanodine receptor type 2 (RyR2) is loaded onto the FKBP12.6-coated plate, and incubated with JTV-519 analogues at various concentrations (10-100 nM) for 30 min. Thereafter, the plate is washed to remove the unbound RyR2, and then incubated with anti-RyR2 antibody for 30 min. The plate is again washed to remove unbound anti-RyR2 antibody, and then treated with florescent-labeled secondary antibody. The plate is read by an automatic fluorescent plate reader for binding activity.

In an alternative assay, RyR2 is PKA-phosphorylated in the presence of 32P-ATP. Radioactive PKA-phosphorylated RyR2 is loaded onto an FKBP12.6-coated, 96-well plate, in the presence of JTV-519 analogues at various concentrations (10-100 nM) for 30 min. The plate is washed to remove the unbound radiolabeled RyR2, and then read by an automatic plate reader.

Example 5 Effect of ARM036 Compounds on hERG Currents

The effects of the compounds of the invention on hERG currents were studied using cultured human embryonic kidney 293 (HEK 293) cells which had been stably tranfected with hERG cDNA. HEK 293 cells do not express endogenous hERG. HEK293 cells were transfected with a plasmid containing the hERG cDNA and a neomycin resistance gene. Stable transfectants were selected by culturing the cells in the presence of G418. The selection pressure was maintained by continued culture in the presence of G418. Cells were cultures in Dulbecco's Modified Eagle Medium/Nutreint Mizture F-12 (D-MEM/F-12) supplemented with 10% fetal bovin serum, 199 U/ml penicillin G sodium, 10 μg/mL streptomycin sulfate and 500 μg/mL G418. Cells for use in electrophysiology were cultured in 35 mm dishes.

Electrophysiological recordings (using the whole-cell patch clamp method) were performed at room temperature (18° C.-24° C.). Each cell acted as its own control. The effect of ARM0036 was evaluated at two concentrations: 10 and 100 μM. Each concentration was tested in at least three cells (n≧3). 90 nM Cisapride (commercially available from TOCRIS Bioscience) was used as a positive control for hERG blockade. For recording, cells were transferred to the recording chamber and superfused with vehicle control solution. The patch pipette solution for whole cell recording contained 130 mM potassium aspartate, 5 mM MgCl₂, 5 mM EGTA, 4 mM ATP and 10 mM HEPES. The pH was adjusted to 7.2 with KOH. The pipette solution was prepared in batches, aliquoted, and stored frozen. A fresh aliquot was thawed and used each day. Patch pipettes were made from glass capillary tubing using a P-97 micropipette puller (Sutter Instruments, Novato, Calif.). A commercial patch clamp amplifier was used for whole cell recordings. Before digitization, current records were low-pass filtered at one-fifth of the sampling frequency.

Onset and steady state block of hERG current was measured using a pulse pattern with fixed amplitudes (conditioning prepulse: +20 mV for 2 seconds; test pulse: −50 mV for 2 seconds) repeated at 10 second intervals, from a holding potential of −80 mV. Peak tail current was measured during the 2 second step to −50 mV. A steady state was maintained for at least 30 seconds before applying the test compound or the positive control. Peak tail current was monitored until a new steady state was achieved. Test compound concentrations were applied cumulatively in ascending order without washout between applications.

Data acquisition and analysis was performed using the suite of pCLAMP (Vre. 8.2) programs (Axon Instruments, Union City, Calif.). Steady state was defined by the limiting constant rate of change with time (linear time dependence). The steady state before and after application of the test or control compounds was used to calculate the percentage of current inhibited at each concentration. Concentration-response data were fit to an equation of the form:

% Block={1−1/[Test]/IC₅₀)N]}×100

where [Test] is the concentration of the test compound, IC₅₀ (inhibitory concentration 50) is the concentration of the test compound producing half-maximal inhibition, N is the Hill coefficient, and % Block is the percentage of hERG current inhibited at each concentration of the test compound. Nonlinear squares fits were solved with the Solver add-in for Excel 2000 (Microsoft, Redmond, Wash.). For some compounds it was not possible to determine the IC₅₀ because the highest concentration of the test compound used did not block the hERG channel by 50% or more.

Example 6 Effect of Various Compounds on hERG Currents

Multiple compounds of the invention were tested for their effects on hERG currents. The compounds tested were: ARM036-Na, ARM047, ARM048, ARM050, ARM057, ARM064, ARM074, ARM075, ARM076, ARM077, ARM101, ARM102, ARM103, ARM104, ARM106, ARM107 and ARM26. By way of comparison, the effect of JTV-519 (referred to in the figures as “ARM00X”) on hERG currents was also tested. Electrophysiological recordings were made using the PatchXpress 7000A (Molecular Devices) automatic parallel patch clamp system. Each compound was tested at 0.01, 0.1, 1 and 10 mM, with each concentration tested in 2 cells (n>2). The duration of exposure to each test concentration was 5 minutes. Other aspects of the experimental protocols were essentially similar to those described in Example 5. For some compounds it was not possible to determine the IC₅₀ because the highest concentration of the test compound used did not block the hERG channel by 50% or more.

Example 7 Effect of S36

The RyCal compounds referred to as S36, S107 were synthesized as described herein.

FIGS. 36-41 show some aspects of the molecular mechanisms which lead to muscle fatigue and the effect of S36 on muscle fatigue.

Drug Delivery:

Eight-week-old, wild-type, weight-matched, C57BL/6J littermate mice were randomized to either S36 or vehicle treatment. On day −2, osmotic infusion pumps (Alzet Model 2004, 200 μl total volume, 0.25 μl/hr delivery, Durect, Cupertino, Calif.) filled with either 200 ul of PBS or 200 μl of S36 (10 μg/ul diluted in PBS) were implanted subcutaneously on the dorsal surface of the mice by a horizontal incision just behind the neck. Mice were allowed to recover for three days prior to the initiation of exercise. Standard food and water were provided ad libitum.

Exercise Protocols:

Beginning on day 1, mice were exercised for three weeks by swimming 5 days/week and by running on a treadmill an additional 1 day/week.

Swimming Model:

The daily swimming protocol consisted of swimming sessions twice-daily separated by one-hour rest periods. After an initial conditioning regimen lasting 5 days during which the swimming sessions were increased in 10 minute increments from 40 minutes each to 80 minutes each, the swimming sessions thereafter lasted 90 minutes each. A 30 cm wide by 30 cm long opaque acrylic tank was filled with tap water to a depth of at least 20 cm. Water was circulated and warmed to 32-34 degrees C. using a separate reservoir with heating element, thermostat, and pump. Compressed room air was bubbled from Tygon tubing with small needle holes placed at the bottom of the tank to agitate the water surface. 4 mice, matched pair-wise with respect to treatment group, swam at any one time in the tank. Littermates who did not exercise were reserved as negative controls.

In order to track the swimming activity of each individually identified mouse, a video tracking system was used (San Diego Instruments, San Diego, Calif.), which includes Sony CCD video recorder, DVD/Hard Drive, frame grabber card, and custom SMART 2.0 software with Social Behavior package capable of tracking up to 8 mice simultaneously under ideal conditions.) Mice were anesthetized by using 1.5% isoflurane in O₂, and small, 0.75 cm, Velcro coins were sutured with 5-0 nylon suture to the scalp of each mouse. Plastic 1 cm colored dots, glued to the hook side of the Velcro, could be securely attached to the mouse and used for multiple subject tracking under appropriate lighting conditions. Each resultant mouse track in x,y, and time was analyzed and mean velocities, and distance swam over 2, 5, and 10 minute intervals was obtained.

Treadmill Running:

A Columbus Instruments (Columbus, Ohio) treadmill (Model: Exer-6M Treadmill with Treadmill Shock Detection Unit) with 6 lanes was used to run the mice. Mice were placed in their respective lanes at the lowest speed (7 meters/min) with the shocking apparatus turned off and allowed to adjust to the surroundings for 6 minutes. The forward half of the treadmill was covered with aluminum foil to block out light. A desk lamp illuminated the shocking area at the rear of the treadmill. After the adjustment period, the electric current was turned on, and the number of shocks delivered during the next two three minute intervals (training period) were recorded. The shock counter was then reset, the speed was increased to 10 m/min, and visits to the shocking area and shocks delivered to each mouse were recorded at three-minute intervals until the end of the experiment. At regular intervals, the speed of the treadmill was ramped up from the initial 10 m/min to as high as 36 m/min. The speed was increased no more than 2 m/min every 6 minutes. Consistent treadmill speed increases were used for all mice on a given day, but the protocol increased in difficulty over the course of the 21 day experiment. Task failure was defined when a mouse could not continue running to avoid the shocking area and gave up or when the mouse had received 200 cumulative shocks. In nearly all cases, these two times were very close to identical.

Muscle Isolation:

Following the 21^(st) and 22^(nd) day of exercise, mice were swum a final time on a staggered schedule. Following 90 minutes of swimming, each mouse was immediately sacrificed by carbon dioxide inhalation and cervical dislocation. Blood was removed by intracardiac aspiration, spun down, and plasma was eluted and frozen in liquid nitrogen. Both extensor digitorum longus (EDL) muscles were exposed, moistened with Tyrode's solution, and 4-0 silk sutures were tied to the proximal and distal tendons and the muscles were dissected free. The muscles were perfused with Tyrode's solution containing 2.0 mM CaCl₂, bubbled with 100% O₂, warmed to 35 C, and hung on isometric force transducers (F-30, Harvard Apparatus, Cambridge, Mass.). After equilibration for 10 minutes at a resting tension of 1 cN and a brief potentiation protocol, force-frequency relationships were measured, with 60 second delays between 800 ms stimulations at 40-150 Hz. Fatigue was produced with a protocol of 50 Hz tetani (each 600 ms long) every 2 seconds for 120 seconds. DMC v4.1.6 (Aurora Scientific, Canada) was used to stimulate and record muscle responses, and DMA v3.2 (Aurora Scientific, Canada) was used to analyze the resultant data.

Following stimulation, muscle length was determined at the resting tension, and muscle dry weight was recorded. One EDL muscle was frozen in isopentane (−80° C.) for histology and the other was frozen in liquid N₂ for biochemistry.

In addition, both soleus muscles were dissected and likewise one was frozen in isopentane for histology and one was frozen in liquid N₂ for biochemical analysis. The vastus lateralis, heart, and diaphragm were also dissected from each animal and frozen in liquid N₂ for biochemical analysis.

Biochemistry:

RyR channels were immunoprecipitated from skeletal muscle homogenates with anti-RyR antibody in 0.5 ml of buffer (50 mM Tris HCl buffer, pH 7.4 0.9% NaCl 5.0 mM NaF 1.0 mM Na₃VO₄ 0.5% Triton X-100+protease inhibitors) for 1 hour at 4° C. The samples were incubated with protein A Sepharose beads (Amersham Pharmacia) at 4° C. for 1 h, after which the beads were washed three times with buffer. Proteins were separated on SDS PAGE gels (6% for RyR2 and 15% for calstabin2) and transferred onto nitrocellulose membranes overnight (SemiDry transfer blot, Bio-Rad). After incubation with 5% nonfat milk to prevent non-specific antibody binding and a wash in Tris-buffered saline with 0.1% Tween-20, membranes were incubated for 1-2 h at room temperature with primary antibodies anti-calstabin (1:1,000), anti-RyR (5029; 1:5,000), or anti-phospho-RyR2-pSer2809 (1:5,000), which detects PKA-phosphorylated mouse RyR1-pSer2844 and RyR2-pSer2808. After three washes, membranes were incubated with horseradish peroxidase-labeled anti-rabbit IgG (1:5,000, Transduction Laboratories, Lexington, Ky.), and developed with an enhanced chemiluminescent detection system (Amersham Pharmacia). Band densities were quantified by using QUANTITY ONE software (Bio-Rad).

Example 8 Effect of S107

FIGS. 42-55 show molecular mechanisms of muscle fatigue and the effect of S107.

Drug Delivery:

Eight-week-old, weight-matched, C57BL/6J littermate mice were randomized to dosing with either S107 or vehicle (H₂O). On day −3 of each trial, osmotic pumps (Alzet Model 2004, 200 ul total volume, 0.25 ul/hr delivery, Durect, Cupertino, Calif.) filled with either 200 ul of PBS or 200 ul of S107 (10 ug/ul diluted in H₂O) were implanted subcutaneously on the dorsal surface of each mouse by a horizontal incision on the neck. Mice were allowed to recover for three days prior to the initiation of exercise. Standard food and water were provided ad libitum through the experiment.

Chronic Exercise Model:

The daily swimming protocol consisted of twice-daily swimming sessions separated by a one-hour rest period. After an initial conditioning regimen lasting 5 days during which the swimming sessions were increased in 10 minute increments from 40 minutes each to 80 minutes each, the swimming sessions thereafter lasted 90 minutes each. A 30 cm wide by 30 cm long opaque acrylic tank was filled with tap water to a depth of at least 20 cm. Water was circulated and warmed to 32-34° C. using a separate reservoir with heating element, thermostat, and pump. 8 mice, balanced pair-wise with respect to genotype and/or treatment group, swam at any one time in the tank. Littermates who did not exercise were reserved as sedentary controls.

In order to confirm that uniform exercise conditions were achieved, pilot experiments were performed in which the motion of each individually identified mouse was tracked with a video tracking system (San Diego Instruments, San Diego, Calif.). Individual recorded tracks over the full 90 minutes of each swim were analyzed for distance swam, mean velocities over time, etc. using the SMART 2.0 software with Social Behavior package (San Diego Instruments). No significant differences in the degree of exercise were noted.

Treadmill Performance:

A Columbus Instruments (Columbus, Ohio) treadmill (Model: Exer-6M Treadmill with Treadmill Shock Detection Unit) with 6 lanes was used to run the mice. Mice were placed in their respective lanes with the shocking apparatus turned off and allowed to adjust to the surroundings for 10 minutes. The forward half of the treadmill was covered with aluminum foil to block out light and a desk lamp illuminated the shocking area at the rear of the treadmill. After the adjustment period, the treadmill was set to 10 meters/min, and the mice were trained to run with gentle prodding for 6 minutes. The electric current was then turned on, and the number of shocks delivered during the next two three minute intervals (training period) were recorded. The shock counter was then reset and visits to the shocking area and shocks delivered to each mouse were recorded at three-minute intervals until the end of the experiment. At regular intervals, the speed of the treadmill was ramped up from the initial 10 m/min to 24 m/min. The speed was increased no more than 2 m/min every 6 minutes. Task failure was defined when a mouse could not continue running despite gentle prodding.

Intact Muscle Preparation:

Immediately following a forced exercise session, each mouse was sacrificed by carbon dioxide inhalation and cervical dislocation. Blood was removed by intracardiac aspiration, spun down, and plasma was eluted and frozen in liquid nitrogen. 4-0 silk sutures were tied to the proximal and distal tendons of intact EDL and soleus muscles and the muscles were dissected free and placed in a modified Ringer's solution (140 mM NaCl, 5 mM KCl, 2.0 mM CaCl₂, 2 mM MgCl₂, 10 mM HEPES, 10 mM glucose, pH 7.4) bubbled with 100% O₂. Muscles were hung vertically in 50 mL Radnoti jacketed glass chambers with one tendon attached with 4-0 silk suture to an isometric force transducer (F30, Harvard Apparatus, Cambridge, Mass.) and the other tendon attached by suture to a stationary arm with built in platinum stimulating plate electrodes. After perfusion with 35C Ringer's and equilibration for 10 minutes at a resting tension of 1 cN and a brief potentiation protocol, force-frequency relationships were measured, with 60 second delays between 800 ms stimulations at 40-150 Hz. DMCv4.1.6 (Aurora Scientific, Canada) was used to stimulate and record muscle responses, and DMA v3.2 (Aurora Scientific, Canada) was used to analyze the resultant data. Following stimulation, muscle length was determined at resting tension, and muscle dry weight was recorded.

Confocal Microscopy:

Single flexor digitorum brevis (FDB) fibers were enzymatically dissociated by standard methods (Reiken, Lacampagne et al. 2003). Briefly, the muscle was dissected from the paw, placed in a modified Ringer's solution, and stripped of all fascia. Type 1 collagenase (2 mg/ml, Sigma) in Ringer's solution was prepared fresh, and the muscle was digested for 2 hours at 37° C. in a incubator shaking at 125 rpm. The muscle was placed in fresh Ringer's and gently triturated. Single fibers were collected and allowed to attach to glass coverslips coated in laminin (Sigma L-2020). The cells were loaded with 2 μM fluo4-AM ester (Invitrogen) for 20 minutes, placed on the Zeiss Live 5 microscope stage and superfused for 15 minutes with Ringer's. The fibers were paced at 1 Hz for 10 minutes prior to imaging baseline fiber properties. Linescan images were continuously acquired at 1 ms scan rate during a tetanic sequence consisting of 300 ms stimulation at 100 Hz with a 2 Hz train rate. Images were analyzed in ImageJ, and an F/F0 ratio was calculated for each fiber.

Human Exercise Protocol:

Three weeks prior to test sessions, subjects reported to the Human Performance Laboratory at Appalachian State University for baseline measurements of cardiorespiratory fitness and body composition. On three consecutive test session days, subjects ate a standardized breakfast (7-8:00 am) and lunch (completed by 12:30 pm), and then reported to the ASU Human Performance Laboratory at 2:00 pm. Subjects exercised on exercise bikes at 70% VO_(2max) from 3:00-6:00 pm. Test sessions days were Monday, Tuesday, and Wednesday afternoons. Oxygen consumption and other metabolic parameters were measured using a metabolic cart (with a mouthpiece and noseclip) every 30 minutes, and blood lactate and glucose (via finger stick) every 60 minutes to verify that subjects were adhering to the prescribed exercise workloads. Subjects ingested 0.5-1.0 liters water every hour of exercise while avoiding all forms of ingested energy (e.g., bars, drinks). Resting control subjects sat in the laboratory during the exercise test sessions. Blood, urine, and saliva samples were collected 15-30 minutes before exercise/sitting, and then within 5-10 minutes post-exercise on each of the 3 test sessions. Muscle biopsy samples were obtained 15-30 minutes before exercise/sitting, and then within 5-10 minutes post-exercise using a needle biopsy procedure on Days 1 and 3. Four samples were taken (two from each thigh), about 2 inches apart. Biopsies were snap frozen in liquid nitrogen and stored at −80° C.

Single Channel Recording and Data Acquisition:

SR vesicles from skeletal muscle of sedentary mice and mice chronically exercised and treated either with vehicle or S107 were prepared as described previously (Reiken, Lacampagne et al. 2003). RyR1 channels were reconstituted by spontaneous fusion of microsomes into the planar lipid bilayer (a mixture of phosphatidylethanolamine and phosphatidylserine in a 3:1 ratio, Avanti Polar Lipids). Planar lipid bilayers were formed across a 200 μm aperture in a polysulfonate cup (Warner Instruments, Inc.), which separated two bathing solutions (1 mM EGTA, 250/125 mM HEPES/Tris, 50 mM KCl, 0.5 mM CaCl₂, pH 7.35 as cis solution and 53 mM Ba(OH)₂, 50 mM KCl, 250 mM HEPES, pH 7.35 as trans solution). After incorporation, RyR1 channel activity was recorded continuously for at least 10 minutes. The concentration of free Ca²⁺ in the cis chamber was calculated with WinMaxC program (version 2.50) (Bers, Patton et al. 1994). Single channel currents were recorded at 0 mV using the Axopatch 200A patch-clamp amplifier (Axon Instruments, USA) in gap-free mode, filtered at 1 kHz, and digitized at 10 kHz. Data acquisition was performed using Digidata 1322A and Axoscope 9 software (Axon Instruments, USA). The recordings were analyzed using Clampfit 10.1 (Molecular Devices, USA) and Origin software (ver. 6.0, Microcal Software, Inc., USA).

Analysis of Ryanodine Receptor Complex:

10 mg muscle samples were isotonically lysed. The ryanodine receptor (RyR1) was immunoprecipitated by incubating 250 μg of homogenate with anti-RyR antibody (2 μl 5029 Ab) in 0.5 ml of a modified RIPA buffer (50 mM Tris-HCl pH 7.4, 0.9% NaCl, 5.0 mM NaF, 1.0 mM Na₃VO₄, 0.5% Triton-X100, and protease inhibitors) for 1 hr at 4° C. The samples were incubated with protein A Sepharose beads (Amersham Pharmacia) at 4° C. for 1 h, after which the beads were washed three times with buffer. Proteins were separated on SDS-PAGE gels (4-20% gradient) and transferred onto nitrocellulose membranes overnight (SemiDry transfer blot, Bio-Rad). After incubation with blocking solution (LICOR Biosciences, Lincoln Nebr.) to prevent non-specific antibody binding and a wash in Tris-buffered saline with 0.1% Tween-20, membranes were incubated for 1-2 h at room temperature with primary antibodies anti-calstabin (1:2500 in blocking buffer), anti-RyR (5029, 1:5,000), or anti-phospho-RyR2-pSer2809 (1:5000), which detects PKA-phosphorylated mouse RyR1-pSer2844 and RyR2-pSer2808, anti-PDE4D3 (1:1000). After three washes, membranes were incubated with infrared labeled secondary antibodies (1:10,000 dilution, LICOR Biosystems). Band densities were quantified using the Odyssey Infrared Imaging System (LICOR Biosciences).

Calpain and Creatine Kinase Assays:

Tissue calpain activities were measured using a calpain activity assay kit (Calbiochem, San Diego, Calif.) (FIG. 42B). This assay is based on the degradation of the fluorescent peptide substrate Suc-LLVY-AMC (Calbiochem). Muscle homogenates were diluted to a final concentration of 600 μg/ml and the calpain activity in the homogenate was determined as per manufactures instructions. Plasma creatine kinase (CK) activity was assayed using the regent kit from Pointe Scientific, Inc. (Canton, Mich.) (FIG. 42A). Plasma samples (duplicates, 5 μl each) were added to 200 μl of CK reagent and the change in absorbance at 340 nM was recorded over 4 minutes using a plate reader. The average absorbance change per minute was used to determine the CPK levels as per manufacturer's instructions.

Statistics:

Data are presented as mean±SEM. Independent t-test with a significance level of 0.05 was employed to test differences between cal1−/− and WT, PDE4D−/− and WT, and Ex+veh and Ex+S107, except as noted below. The distributions of treadmill failure data were found in several cases to be asymmetric. As such, Wilcoxon rank sum tests were used for all such data comparisons.

High Intensity Exercise Induces RyR1 PKA Hyperphosphorylation, and Depletion of Calstabin1 and PDE4D3 from the Channel Complex:

Exercise models in the mouse have been grouped into two categories: 1) voluntary exercise including running wheels; and 2) involuntary exercise, including swimming or forced treadmill runs to exhaustion. In order to achieve high intensity exercise, a twice daily swimming protocol was adapted to achieve uniform exercise in mice over days to weeks. This mouse exercise protocol was not designed to be either explicitly eccentric or isometric in character, but rather a physiologic mix of eccentric and isometric exercise. Following forced exercise, RyR1 was immunoprecipitated out of whole muscle homogenates from hind limb muscles, and the RyR1 channel complex was size-fractionated on SDS-PAGE and immunoblotted for channel complex components. High-intensity exercise in the mouse resulted in progressive phosphorylation of RyR1 at the PKA site Ser2844 (RyR1-pS2844) that saturated by 14 days of twice daily swimming (90 min sessions, e.g. FIG. 43A).

In addition, the RyR1 macromolecular complex from extensor digitorum longus (EDL) muscle underwent remodeling, including depletion of calstabin1 and PDE4D3 from the channel by day 14 (FIGS. 43A and 43B). An identical pattern of biochemical changes was seen in all other hind limb skeletal muscles isolated from the same mice, including soleus, tibialis anterior, and gastrocnemius. RyR1 PKA hyperphosphorylation and depletion of calstabin1 and PDE4D3 were dependent on the intensity of the exercise, with only relatively high intensity exercise resulting in significant channel modifications (FIGS. 43C and 43D). Furthermore, the remodeling of the RyR1 channel complex persisted after exercise and recovered only partially following three days of rest after chronic exercise (FIG. 51A). PKA hyperphosphorylation of RyR1 was not due to changes in the amount of PKA and PP1 bound the RyR1 complex, as these levels were not affected by exercise conditions (FIGS. 51A and 51B). Calstabin1 levels in whole muscle homogenate, measured by immunoblot, were not altered during exercise (FIG. 51C). Thus, intense daily exercise, over weeks causes remodeling of the RyR1 channel complex manifested by depletion of the phosphodiesterase PDE4D3 from the channel, PKA hyperphosphorylation, and depletion of the stabilizing subunit calstabin1 from the RyR1 channel complex.

RyR1 channel defects occur during human exercise: To assess whether the remodeling of the RyR1 channel macromolecular complex observed in exercised mice is relevant to human physiology, human thigh muscle biopsies were obtained from trained athletes before and after exercise on Days 1 and 3 of a high-intensity exercise protocol (cycling 3 hr/day at 57% of VO₂max) (Nieman, Henson et al. 2006). The human RyR1 macromolecular complex was immunoprecipitated from muscle homogenate, size fractionated by SDS-PAGE, and immunoblotted to assess RyR1 PKA phosphorylation and levels of calstabin1 and PDE4D3 in the RyR1 complex. High intensity exercise resulted in PKA hyperphosphorylation of RyR1 and calstabin1 depletion compared to controls who did not exercise (FIG. 44). Prior to exercise on Day 3, PKA phosphorylation of RyR1 in the trained cyclists was at or near resting levels and no significant calstabin1 depletion from the RyR1 complex was observed, however, PDE4D3 was stably depleted from the RyR1 complex by the beginning of the third day of the high intensity exercise (FIG. 44B). Thus, the same remodeling of the RyR1 channel complex observed in chronically exercised mice occurs in highly trained athletes subjected to intense exercise.

Muscle-Specific Calstabin1−/− Mice have a High-Intensity Exercise Defect:

Muscle-specific deficiency of calstabin1 has been previously shown to be associated with alterations in the force-frequency relationships of isolated muscle preparations and a reduction in Cav1.1 current (Tang, Ingalls et al. 2004). To determine if calstabin1 binding to RyR1 has an effect on exercise performance, we assessed treadmill run to exhaustion times in mice with muscle-specific deficiency of calstabin1 (cal1−/−). There was a significant defect in the high intensity exercise capacity of cal1−/− mice compared to WT littermate controls (FIG. 45A). The exercise defect was similar in both males and females (FIG. 45B), and despite a small reduction in the body weights of the cal1−/− mice (FIG. 45C), there was no correlation between failure time and reduced body weight (FIG. 45D). The exercise defect was most apparent in high intensity exercise (treadmill speeds equal to or greater than 24 m/min) or in eccentric exercise such as 14 degree downhill treadmill runs. 0/2 cal1−/− mice were able to complete a 30 min downhill treadmill exercise protocol while 2/2 WT littermates were able to complete the protocol.

Twenty-four hours following a downhill exercise regimen (as described herein), plasma creatine kinase (CPK), was elevated consistent with increased muscle damage in the cal1−/− mice compared to WT littermate controls (FIG. 45E). Following several weeks of daily exercise training, the exercise capacity of WT mice approached that of cal1−/− presumably because of the progressive depletion of calstabin1 from the RyR1 complex that occurs with chronic exercise in WT mice (FIG. 43) resulting in an exercised-induced depletion of calstabin1 from the RyR1 channel complex that is comparable to that observed prior to exercise in the cal1−/− mice (FIG. 45F). Thus, muscle-specific calstabin1 deficient mice exhibit enhanced fatigue consistent with depletion of calstabin1 from the RyR1 complex playing a role in muscle fatigue.

PDE4D−/− Mice Exhibit an Exercise Defect:

Global deficiency of PDE4D results in an age-dependent progressive cardiomyopathy (Lehnart, Wehrens et al. 2005). Prior to the age of three months, however, PDE4D−/− mice exhibit no cardiac defect as determined by echocardiogram or cardiac catheterization. The exercise capacity of 2 month-old PDE4D−/− mice was compared with their WT littermates. A significant reduction in exercise capacity was observed (FIG. 46A) without any correlation with body weight (FIG. 46B,C,D). Remarkably, CPK levels were increased, consistent with muscle damage at rest, in PDE4D−/− mice relative to WT littermate controls, and there was a significant increase in CPK levels 24 hours following a single episode of eccentric exercise consisting of thirty minutes of downhill treadmill running (FIG. 46E) in PDE4D−/− mice. PDE4D−/− mice exhibited an absence of RyR1 bound PDE4D3, a small increase in basal RyR1 PKA phosphorylation, and a significant increase in calstabin1 depletion following only a single day of mild exercise (FIG. 46F). These data show that PDE4D3 plays a significant role in the RyR1 complex by regulating the extent of PKA phosphorylation of RyR1 and that depletion of PDE4D3 from the channel complex during exercise promotes PKA phosphorylation of RyR1 which in turn contributes to muscle damage and skeletal muscle fatigue during exercise.

Pharmacologic Rebinding of Calstabin1 to RyR1 Improves Chronic Exercise Performance:

Having demonstrated that a deficiency of calstabin1 is associated with an exercise defect and that chronic or high intensity exercise can result in calstabin1 depletion from RyR1, the effect on chronic or high intensity exercise performance of pharmacologic rebinding of calstabin1 to RyR1 was determined. 1,4-benzothiazepine derivatives, RyCal compounds, were screened to identify compounds with increased target activity, improved specificity (absence of activity against other known ion channels) and in vivo efficacy in terms of improved exercise capacity. Compound S107 at a concentration of 500 nM was found not to affect L-type calcium channel current or hERG potassium current.

Age and sex-matched WT mice were randomized to receive osmotic pumps containing either S107 or vehicle. Dosing with S107 at 2.5 ug/hr or vehicle was initiated four days prior to the beginning of a 21-day forced swimming exercise protocol. Exercise capacity was assessed once a week by a level treadmill run to exhaustion during the nocturnal cycle of the mouse. The mice were not exercised on the same day as treadmill assessments. FIG. 47A shows that calstabin1 rebinding with S107 had no acute effect on WT exercise performance, but that over time the S107 treated WT mice were relatively protected against a decline in treadmill exercise capacity that occurred in vehicle treated mice (p<0.05 Wilcoxon rank test, S107 vs. vehicle at Day 21). These studies are complicated by the training effect of repeated exercise which leads to improved performance due to enhanced musculature. Individual treadmill failure times on Day 21 are shown in FIG. 47B. Isometric force production was measured in EDL muscles in a tissue bath during field stimulation.

EDL muscles from S107 treated mice showed increased force production at stimulation frequencies greater than 80 Hz consistent with a left-shift of the force-frequency relationship (FIG. 47C). Drug treatment did not result in a change in body weight (FIG. 47D) or muscle weight. In parallel chronic exercise trials with mice deficient in calstabin1, S107 failed to improve treadmill performance (FIG. 47E). The chronic exercise protocol resulted in substantial PKA phosphorylation of RyR1 and calstabin1 depletion from immunoprecipitated RyR1. Calstabin1 depletion from RyR1 was nearly entirely reversed by S107 treatment (FIG. 47F). Taken together these data show that preventing the SR Ca²⁺ leak due to PKA hyperphosphorylated RyR1 channel with a drug that enhances calstabin1 binding to the channel can protect against muscle damage, muscle fatigue, enhance muscle function and improve exercise performance during fatigue protocols.

Reduced Fatiguability in Calstabin1 Rebound FDB Muscle Fibers:

Flexor digitorum brevis (FDB) muscle fibers were enzymatically dissociated from mice following the chronic exercise protocol and loaded with the calcium indicator fluo-4. Individual muscle fibers were imaged on a Zeiss Live5 confocal microscope during field stimulation at 1 Hz and during a fatiguing protocol consisting of repeated 300 ms long 120 Hz tetani every 2 seconds for 400 seconds. Representative F/F0 traces during the fatigue protocol are shown for a FDB fiber isolated from a vehicle treated mouse (FIG. 48A) and a S107 treated mouse (FIG. 48B). FDB fibers from S107 treated mice exhibited a delayed decline in peak tetanic calcium transients (FIG. 48C). It is known that muscle fibers with slower kinetics of Ca²⁺ release and reuptake are less prone to fatigue. The kinetics of Ca²⁺ release and reuptake during single twitches at 1 Hz were assessed. The distribution of 50% reuptake times (tau) showed no significant differences between vehicle and S107 treatment (FIG. 52), indicating no shift in the calcium reuptake kinetics of the FDB fibers. These data indicate that treatment with S107 improves Ca²⁺ handling in muscle fibers during fatigue protocols.

Chronic Exercise Results in Leaky RyR1 Channels which can be Reversed by Calstabin1 Rebinding:

A critical issue is whether the biochemical changes in the RyR1 macromolecular complex identified during exercise result in changes in RyR1 channel activity. To address this directly, SR microsomes were prepared from the hind limb muscle of sedentary mice, mice chronically exercised and treated with vehicle, and mice chronically exercised and treated with S107. Using standard techniques, vesicles were fused to planar lipid bilayers and the single channel activity of incorporated RyR1 channels was continuously measured for at least 10 minutes at 90 nM [Ca²⁺]_(cis) (FIG. 49A). In agreement with previously published data (Meissner, 1994, Reiken, 2003), the activity of RyR1 from sedentary mice at resting calcium concentrations was very low resulting in a small number of openings over long period of time (in some experiments as long as 20 min of recording was necessary to calculate an open probability for the channel). In contrast, RyR1 channels from mice chronically exercised and treated with vehicle displayed increased activity with significantly higher open probabilities (p<0.005, Ex+veh, n=9 vs sedentary, n=9) due to an increased frequency of openings (FIG. 49B). Administration of S107 caused a significant decrease of RyR1 open probability (p<0.005, Ex+S107, n=12 vs Ex+veh, n=9) to a level comparable to that observed in channels from sedentary mice. Neither chronic exercise nor S107 had any effect on the duration of the channel dwell times meaning that observed changes in open probability were due to changes in the number of opening events (FIG. 49B). These data show that RyR1 channels from exercised animals exhibit “leaky” channel behavior (increased open probability) and that channels from animals treated with S107 were not “leaky”.

Reduced Calpain Activation in Muscle Tissue and Reduced Muscle Tissue Damage Due to Calstabin1 Rebinding:

One possible mechanism by which calcium released by leaky RyR1 channels impairs exercise performance is the activation of a member of the calpain family of Ca²⁺-dependent neutral proteases, which are known to be responsible for muscle damage in a number of pathophysiological states. (Belcastro 1993; Berchtold, Brinkmeier et al. 2000). Calpain activity in muscle homogenates was assessed by means of the degradation of the synthetic calpain substrate Suc-LLVY-AMC, which fluoresces upon cleavage by calpain. Chronically exercised EDL muscle exhibited elevated calpain activity compared to sedentary controls. Calpain activity was significantly reduced in S107 treated and chronically exercised mice (FIG. 50A). Evidence of a protection from muscle damage was further provided by measurement of plasma CPK activity levels which were elevated in the chronically exercised mice, but reduced close to the levels observed in sedentary controls in the S107 treated mice (FIG. 50B). Muscle histology showed evidence of muscle hypertrophy with some inflammation and scattered loci of damaged fibers in the chronically exercise mice, without evidence of extensive necrosis in either treatment group.

Example 9 Muscular Dystrophy and Effects of S107

RyR1 calcium release channels become PKA hyperphosphorylated and depleted of the stabilizing protein calstabin1 during exercise. The compounds of the invention increase the binding affinity of calstabin1 to PKA hyperphosphorylated RyR1. These compounds (referred to as called “calcium channel stabilizers” or “rycal”) are 1,4-benzothiazepines and derivatives thereof. Treatment with these compounds improves exercise performance of mice running on a treadmill. A calcium leak via PKA hyperphoshorylated RyR1 channels causes muscle damage due to activation of calcium-dependent proteases and rycals prevent the calcium leak and inhibit muscle damage during chronic exercise. Rycals can be used to improve muscle fatigue in chronic diseases including heart failure, AIDS, cancer, renal failure, and can also be used to treat muscular dystrophies.

Duchenne muscular dystrophy (DMD) is an X-linked muscle disease characterized by mutations in the dystrophin gene. Increased calcium-activated calpain proteolysis in the sarcolemma membrane is thought to be a primary mechanism in the pathophysiology of DMD. The mdx mouse, carrying a stop codon inside exon 23 of the dystrophin gene, provides a useful system to study the effectiveness of different therapeutic strategies for the cure of this disease.

A RyCal compound, S107, reduces calpain activity in mdx mice during exercise. FIGS. 42, 53, 54, 55 provide data from these studies. This indicates that RyCals may be useful for treating muscle related diseases, including, but not limited to, muscular dystrophies.

Animal Model:

Mdx mice (21 days old) were treated with S107 (0.125 mg/kg/h) or vehicle using implantable, osmotic pumps for 28 days. After treatment, the mice were subjected to downhill (14° angel) treadmill running for 30 min at 18 m/min. Immediately after the exercise, the animals were sacrificed and the skeletal muscles were harvested.

Preparation of EDL Homogenates:

EDL muscles homogenates were prepared in 0.5 ml of homogenization buffer (20 mM NaF, 10 mM Tris-maleate, pH7.2+protease inhibitors). Cardiac sarcoplasmic reticulum (CSR) fractions were obtained by centrifuging the homogenates at 50,000×g for 30 min. Homogenates were centrifuged at 4000×g for 20 min and the supernatants were centrifuged for 20 min at 10000×g. Aliquots of the homogenates were assayed for protein concentration and stored at −80° C.

Calpain Activity Assay:

Calpain activity of EDL homogenates (30 μg) were measured using a Calpain Activity Assay kit (Calbiochem). The assay utilizes a synthetic calpain substrate, suc-LLVY-AMC. AMC is released upon cleavage with calpain and is measured fluorometrically. Assays are performed with both an activation and an inhibition buffer to determine specific calpain activity in the sample.

Serum Creatine Kinase:

Serum (10 μl) proteins were separated using 4-20% PAGE. After transferring the proteins to nitrocellulose, the immunoblots were developed using an anti-creatine kinase Antibody (Research Diagnostics, 1:1000 dilution). Bands were quantified by densitometry.

Immunoprecipitation of Ryanodine Receptor:

The ryanodine receptor (RyR1) was immunoprecipitated from samples by incubating 250 μg of EDL homogenate with anti-RyR antibody (2 μl 5029 Ab) in 0.5 ml of as modified RIPA buffer (50 mM Tris-HCl (pH 7.4), 0.9% NaCl, 5.0 mM NaF, 1.0 mM Na₃VO₄, 0.5% Triton-X100, and protease inhibitors) 1 hr at 4° C. The samples were incubated with Protein A sepharose beads (Ammersham Pharmacia Biotech, Piscatawy, N.J.) at 4° C. for 1 hour, after which, the beads were washed three times with RIPA. Samples were heated to 95° C. and size fractionated by PAGE.

Western Analysis:

Samples (immunoprecipitates or 10 μg CSR) were heated to 95° C. and the proteins were size fractionated on 6% SDS PAGE for RYR and 15% PAGE for calstabin. Immunoblots were developed using antibodies against RyR (5029, 1:5000 dilution), PKA phosphorylated RyR (1:10000), or Calstabin (1:2000). Dilutions are made in 5% milk in TBS-T.

Example 10 Preparation of Tissue Lysates

Tissue lysates were prepared by homogenizing the tissue (e.g., brain, cardiac, muscle) with Tissuemiser in 0.7 ml lysis buffer (pH 7.4, 10 mM HEPES, 1 mM EDTA, 20 mM NaF, 2 mM Na₃ VO₄, 320 mM sucrose, and protease inhibitors) and centrifuged for 15 min at 4,000×g at 4° C. The supernatant was then centrifuged for 15 min at 10,000×g at 4° C. For brain homogenates, the supernatant was centrifuged at 50,000×g at 4° C. for 30 minutes, and the pellet (microsomes) was resuspended in homogenization buffer which was supplemented with 0.9% NaCl. For brain tissue, the resuspended pellet was used for immunoprecipitation of RyR. For cardiac and muscle tissue homogenates, the supernatant of the 10,000×g spin was used for immunoprecipitation of the RyR. Protein concentrations were measured by Bradford protein assay. The sample was frozen at −80° C. until use.

Example 11 Immunoprecipitation of Ryanodine Receptors (RyRs)

100 μg of microsomes were brought to a volume of 500 μl with modified RIP A buffer (50 mM Tris-HCl (PH 7.4), 0.9% NaCl, 5.0 mM NaF, 1.0 mM Na₃VO₄, 0.5% TritonX100, and protease inhibitors). The ryanodine receptor was immunoprecipitated by adding 21 of anti-RyR antibody (5209) and rotating the sample for 1 hr at 4° C. The sample was incubated with 40 μl of Protein A Sepharose beads and rotated for 1 hr at 4° C. After washing the beads with 500 μl RIP A buffer three times, the resulted pellet was resuspended in 15 μl of 2X SDS sample buffer and boiled for 5 min.

For Western Blot Analysis, proteins were size fractionated on SDS-PAGE 4-20% gradient (BioRad). Immunoblots were developed with anti-FKBP and anti-RyR antibody or anti-phosphorylated FKBP.

Example 12 Effects of S107 on Spatial Learning and Cognitive Function

Experiments were performed to determine whether the compounds described herein cross the blood brain barrier and enhance binding of cal stab in to ryanodine receptors in the brain. FIG. 56 shows the results of Western blots performed on RyR immunoprecipitated from the tissue samples indicated (i.e. heart, soleus muscle, mid-brain, and cerebellum). As illustrated in FIG. 56, the compound S107 crosses the blood brain barrier and restores in vivo binding of calstabin to RyR in both the mid-brain and the cerebellum, following depletion of calstabin from the RyR complex by treatment of the mice with isoproterenol (“ISO”) by chronic infusion for 5 days. RyR was immunoprecipitated using an antibody to RyR, and the presence of calstabin in the immunoprecipitates was detected using an antibody to calstabin. The figure shows that the compound S107 penetrates the brain and restores in vivo binding of calstabin to RyR. Thus, S107 has calstabin rebinding activity in the brain.

FIG. 57 provides a schematic representation of in vivo experiments used to test the effect of S107 on cognitive function in mice, using the Morris water maze system (described below in FIG. 58). 16 wild type C57BL/6J 3-month-old mice, pairwise-matched for sex, age, and body weight, were randomized to either S107 treatment (10 mg/ml; 0.25 μl/hr subcutaneous osmotic pump) or “vehicle” (25% DMSO in dH₂O) treatment groups.

Two days after initiation of treatment, mice were subject to an exercise regimen for 21 days, and effect of S107 treatment was assayed by the weekly protocol as described below. Mice were sacrificed after 21 days for performing biochemistry, calcium imaging and ex vivo function studies.

FIG. 58 (A) provides a schematic representation of in vivo experiments used to test the effect of S107 on learning in the Morris water maze system. The layout of the water maze system consists of a circular water tank divided into four quadrants (labeled 1 thru 4 in FIG. 58, with four hidden platforms (labeled 5 to 8 in FIG. 58). The following protocol was followed: Day 1: mice trained to find “hidden” platform with visible marker on platform from random starting location. On days 2-4, the visible cue was removed, and mice were repeatedly challenged to find hidden platform at target 5 in quadrant 1. The time taken for each mouse to reach the target, i.e. the “latency,” was recorded. On day 5, the previous day's protocol was repeated, then the hidden platform was removed, and each mouse's movements recorded to quantify time in various target regions. The protocol was repeated in week 2. The bar graphs at the bottom of FIG. 3 show the latency to target(s) (panel B) and mean velocity (cm/s) (panel C) for the vehicle and S107 treated groups at the end of the 21-day testing period.

The platform was then removed, and the swimming pattern of the mice was assessed at the end of the 21-day testing period. FIG. 59 shows a trend towards improved learning or increased persistence in S107-treated mice as compared to vehicle. FIG. 60 provides graphical data from the above experiments and shows a trend towards altered behavior consistent with improved learning and persistence in the S107-treated mice. p was approximately 0.2 vs. control (n=8 in both groups). The difference in permanence times between S107-treated and vehicle-treated mice does not appear to be due to swimming differences during the 2-minute probe learning assay.

FIG. 61 shows biochemical data for mice subjected to an exercise regimen in the absence and presence of S107 at the end of the 21-day testing period. Ryanodine receptor (types 1 and 2) was immunoprecipitated from whole brain microsomes. Immunoprecipitates were separated by 4-20% PAGE and analyzed for total RyR, PKA phosphorylated RyR, and calstabin. The figure shows exercised-induced RyR1 and RyR2 phosphorylation, accompanied with reduction in calstabin 1 or 2 binding. Treatment with S107 restores the binding of calstabin to RyR in exercised mice.

Example 13 Effects of Restraint Stress on PKA Phosphorylation at Different Stress Periods

FIGS. 62-65 illustrate the effect of restraint stress on PKA phosphorylation at different stress periods. Restraint Stress Model: Chronic stress has been found to induce PKA phosphorylation of ryanodine receptors (RyRs) in cardiac (RyR2) and skeletal (RyR1) muscle cells. The effects of chronic stress on PKA phosphorylation of RyRs in the brain, however, have not been explored. The Restraint Stress Model is designed to investigate whether chronic stress induces PKA phosphorylation of neuronal RyRs. As shown in FIG. 62, twelve C57BL/6J wild type male mice were assigned to different stress groups (n=2/group), generating 6 groups. Five of the 6 groups were stressed and sacrificed at the end of each stress period: 1, 5, 10, 14, and 21 days of stress (respectively 1D, 5D, 10D, 14D and 21D). The remaining group served as control (0D) that was not restrained, and was sacrificed together with the 1D group. Subjects in each stress group were restraint stressed in Plexiglas restrainer tubes (10×2½×3¼ cm) 2 hr in the morning and 2 hr in the afternoon of each stress period. The two nonstressed control subjects were handled in their home cage. At the end of each stress period, subjects were sacrificed (sac) by CO₂ and their brains were immediately removed and frozen for later immunoblot analysis. RyR2 was immunoprecipitated from whole brain microsomes.

FIG. 63 shows the results of PKA phosphorylation of RyR2 channels in brain following restraint induced stress in mice. The mice were restrained for time periods as indicated. Ryanodine Receptor (type 2) was immunoprecipitated from whole brain microsomes. Immunoprecipitates were separated by 4-20% PAGE and analyzed for total RyR2, PKA Phosphorylated RyR2, and calstabin2. FIG. 63 shows stress-induced RyR2 phosphorylation, accompanied with reduction in calstabin 2 binding.

FIG. 64 is a bar graph summarizing the relative amounts of PKA phosphorylation of RyR2 from FIG. 63. The relative phosphorylation of RyR2 is represented using arbitrary units. A one-way ANOVA shows that there was a significant difference between groups [T(5,6)=27.58, P<0.0005]. Fisher's LSD post hoc test reveals that 14 and 21 days of chronic restraint stress (CRS) induced the highest PKA phosphorylation of RyR2 in the brain, where ***(P<0.001) and **(P<0.01) compared with nonstressed controls (0 days). FIG. 65 is a bar graph summarizing the relative amounts of calstabin2 bound to RyR2 from FIG. 63. A one-way ANOVA also shows a group difference between the stress periods [T(5,6)=5.91, P<0.037]. Fisher's LSD post hoc test reveals that only the 21 days of CRS showed the lowest calstabin2 binding to the RyR2 where *(P<0.05) compared with nonstressed controls (0 days).

All publications, references, patents and patent applications cited herein are incorporated by reference in their entirety to the same extent as if each individual application, patent or patent application was specifically and individually indicated to be incorporated by reference in its entirety.

While the foregoing invention has been described in some detail for purposes of clarity and understanding, it will be appreciated by one skilled in the art, from a reading of the disclosure, that various changes in form and detail can be made without departing from the true scope of the invention in the appended claims. 

What is claimed is:
 1. in a method of treating a disorder in a subject caused by a ryanodine receptor channel leak by administering to the subject a therapeutically effective amount of a rycal compound to repair the channel leak to treat the disorder, the improvement which comprises selecting for administration a rycal compound having properties including an EC₅₀ value of 102 nM or less when assayed for its ability to facilitate the rebinding of FKBP12.6 to PKA-phosphorylated RyR2 and less than 50% inhibition of the hERG K⁺ channel (I_(Kr)) when administered at 10 μM to reduce compound toxicity or side effects after administration compared to other rycal compounds not having those properties.
 2. The method of claim 1, wherein the disorder is selected from the group consisting of cardiac disorders or diseases, skeletal muscular disorders or diseases, cognitive disorders or diseases, malignant hyperthermia, diabetes, and sudden infant death syndrome.
 3. The method of claim 2, wherein the cardiac disorders and diseases are selected from the group consisting of irregular heartbeat disorders or diseases; exercise-induced irregular heartbeat disorders or diseases; heart failure, congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure; the skeletal muscular disorders or diseases are selected from the group consisting of skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence; and the cognitive disorders or diseases are selected from the group consisting of Alzheimer's Disease, forms of memory loss, and age-dependent memory loss.
 4. The method of claim 1, wherein the compound is a benzothiazepine compound.
 5. The compound of claim 4, wherein the benzothiazepine compound is a 1,4-benzothiazepine compound
 6. The compound of claim 5, having the formula:

wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; and wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-) arylthio may be substituted or unsubstituted; R₁₅ and R₁₆ independently are selected from the group consisting of H, acyl, alkenyl, alkoxyl, OH, NH₂, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; optionally R₁₅ and R₁₆ together with the N to which they are bonded may form a heterocycle which may be substituted or unsubstituted; R₁₇ is H, —NR₁₅R₁₆, —NHNR₁₅R₁₆, —NHOH, —CH₂X, alkyl, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; and n is 0, 1, or 2; or an enantiomer, diastereomer, tautomer or pharmaceutically acceptable salt thereof.
 7. The compound of claim 6, wherein the compound is selected from the group consisting of:


8. The compound of claim 7, wherein the benzodiazepine compound is S36, S57, S59, S76 or S107 or a pharmaceutically acceptable salt thereof.
 9. The compound of claim 6, wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —OMe, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, —C(C═O)Me, morpholinyl and propenyl; and n is 1 or
 2. 10. A method for reducing toxicity or side effects associated with treatment of a disorder in a subject caused by a ryanodine receptor channel teak, which comprises: identifying a rycal compound that has the ability when administered to the subject in a therapeutically effective amount to repair the channel leak to treat the disorder; testing the compound to determine properties including EC₅₀ when assayed for its ability to facilitate the rebinding of FKBP12.6 to PKA-phosphorylated. RyR2 and hERG K⁺ channel (I_(Kr)) inhibition when administered at 10 μM; and selecting for the treatment a rycal compound that has an EC₅₀ value of 102 or less and less than 50% inhibition of the hERG K⁺ channel (I_(Kr)) in order to reduce toxicity or side effects after administration compared to other rycal compounds not having those properties.
 11. The method of claim 10, wherein the disorder is selected from the group consisting of cardiac disorders or diseases, skeletal muscular disorders or diseases, cognitive disorders or diseases, malignant hyperthermia, diabetes, and sudden infant death syndrome;
 12. The method of claim 11, wherein the cardiac disorders and diseases are selected from the group consisting of irregular heartbeat disorders or diseases; exercise-induced irregular heartbeat disorders or diseases; heart failure, congestive heart failure; chronic obstructive pulmonary disease; and high blood pressure; the skeletal muscular disorders or diseases are selected from the group consisting of skeletal muscle fatigue, exercise-induced skeletal muscle fatigue, muscular dystrophy, bladder disorders, and incontinence; and the cognitive disorders or diseases are selected from the group consisting of Alzheimer's Disease, forms of memory loss, and age-dependent memory loss.
 13. The method of claim 10, wherein the compound is a benzothiazepine compound.
 14. The compound of claim 13, wherein the benzothiazepine compound is a 1,4-benzothiazine compound
 15. The compound of claim 14, having the formula:

wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —NH₂, —NO₂, —CN, —CF₃, —OCF₃, —N₃, —SO₃H, —S(═O)₂alkyl, —OS(═O)₂CF₃, acyl, alkyl, alkoxyl, alkylamino, alkylthio, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-)arylthio, and (hetero-)arylamino; and wherein each acyl, alkyl, alkoxyl, alkylamino, cycloalkyl, aryl, heterocyclyl, heterocyclylalkyl, alkenyl, alkynyl, (hetero-)aryl, (hetero-) arylthio may be substituted or unsubstituted; R₁₅ and R₁₆ independently are selected from the group consisting of H, acyl, alkenyl, alkoxyl, OH, NH₂, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each acyl, alkenyl, alkoxyl, alkyl, alkylamino, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; optionally R₁₅ and R₁₆ together with the N to which they are bonded may form a heterocycle which may be substituted or unsubstituted; R₁₇ is H, —NR₁₅R₁₆, —NHNR₁₅R₁₆, —NHOH, —OR₁₅, —CH₂X, alkyl, alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl; wherein each alkenyl, aryl, cycloalkyl, cycloalkylalkyl, heterocyclyl, and heterocyclylalkyl may be substituted or unsubstituted; and n is 0, 1, or 2; or an enantiomer, diastereomer, tautomer or pharmaceutically acceptable salt thereof.
 16. The compound of claim 15, wherein the compound is selected from the group consisting of:


17. The compound of claim 16, wherein the benzodiazepine compound is S36, S57, S59, S76 or S107 or a pharmaceutically acceptable salt thereof.
 18. The compound of claim 15, wherein R′ and R″ are independently selected from the group consisting of H, halogen, —OH, —OMe, —NH₂, —NO₂, —CN, —OCF₃, —N₃, —S(═O)₂C₁-C₄alkyl, —S(═O)C₁-C₄alkyl, —S—C₁-C₄alkyl, —OS(═O)₂CF₃, Ph, —NHCH₂Ph, morpholinyl and propenyl; and n is 1 or
 2. 